Ipomoea triloba (trilobed morning glory): 116001958
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Entry
116001958 CDS
T07384
Name
(RefSeq) cyclic nucleotide-gated ion channel 17-like
KO
K27629
cyclic nucleotide gated channel 17
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04075
Plant hormone signal transduction
itr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
116001958
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
116001958
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
itr04040
]
116001958
Ion channels [BR:
itr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
116001958
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF4231
Motif
Other DBs
NCBI-GeneID:
116001958
NCBI-ProteinID:
XP_031097796
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Position
13:complement(136422..142683)
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AA seq
724 aa
AA seq
DB search
MKKDKFVSFYSNGKQQKPILWGGEAESSSLEKSSSEYRFSSSWLNPGRKHKITETLKFGR
PKVYPENHEPWRKRILDPGSDIVLKWNWVFIISCLLALFVDPLYFFMPIIGGTKDLSCVR
TDLNLRIVVTIFRTIADFFYLLHVIIKFRTAYVAPNTRVFGRGELVMDPKEIARRYLRSD
FFIDLIATLPLPQIVIWFIIPATRSQHAYHNNNALALIVLIQYIPRLYLIFPLSSQIIKA
TGVVTKTAWAGAAYNLLLYMLASHVLGAAWYLLSVDRYTSCWKSICRDEENSTKCVSRYL
DCDTFDLDARKTWANITSVFKNCDPNGDSTTFKYGIFENAVTKDVVSSSFLEKYFYCLWW
GLQNLSSYGQNLSTTTFIGETSFAILIAILGLVLFAHLIGNMQTYLQSMTVRLEEWRLKR
RDTEEWMQHRQLPEDLRRRVRRFVQCKWVATRGVDEEAILHGLPADLRRDIQRHLCLDLV
RRVPFFSQMDDQLLDAICERIVSCLSTEGTYIVREGDPVTEMLFIIRGRLESCTTNGGRT
GFFNAIMLRPGDFCGEELLAWALHPKSTVNLPTSTRTVRALVEVEAFALRAEDLKFVANQ
FRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRHKRRIMAKDLARMESFALNENEAREE
SERGEDTSTSPTSNQSLTKTNLGVTILASRFAANTRRGAQKIKDVSLPKLQKPEEPDFSA
EADD
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagataagtttgtgagcttctactccaacggaaaacagcaaaaacccatttta
tggggtggagaagctgaatcttcaagtttagagaaatcatcttctgagtatcggttttca
tcatcctggttgaaccccggcagaaaacataaaatcacagaaacccttaagtttgggagg
cctaaggtgtaccctgagaaccatgagccatggagaaagcgaatacttgatccgggtagt
gacattgtgctgaagtggaattgggttttcattatatcctgcttgttggcattgtttgtc
gacccattgtatttttttatgcctattattggaggaactaaggatctaagttgtgtgaga
actgacttgaatttgcgaattgtggtcacaattttccgcactattgctgattttttctat
ctgttgcatgtgatcattaagtttagaactgcttatgttgcccccaatactcgggtattt
ggtagaggtgagcttgtcatggatcctaaggagattgctcggagatatctaagatctgat
ttcttcattgatctgattgcaaccttacctctcccacagattgtcatctggttcattata
ccagcaacaagaagtcaacatgcataccataataataatgcccttgcactgattgtcctg
attcagtatattcccaggttatatcttattttcccactaagttcacagatcattaaagca
actggagttgtcacaaagactgcttgggcaggggctgcatataatctacttctctatatg
ttggctagccatgtcttaggggcagcatggtatttgttgtcagttgatcgatatacatct
tgctggaaatcaatttgcagagatgaagagaattccacaaaatgtgtatctcggtacttg
gattgtgatacttttgaccttgatgctcgcaagacctgggcaaatattactagtgtgttc
aaaaattgtgatcccaatggagatagcactactttcaaatatggcatatttgaaaatgct
gttacaaaagatgttgtctcctcaagttttcttgaaaaatacttctattgcttgtggtgg
ggattacagaacctgagttcttatgggcagaatttgtcaacaaccacatttattggagag
acatcctttgccatacttattgccattttgggcctcgttttattcgcacatcttattggg
aatatgcagacatacctgcaatctatgacagtgaggctcgaggaatggagacttaagcga
agagacactgaagagtggatgcaacatcgacaactcccagaagacttgagaaggcgtgtt
cgacgttttgttcaatgtaaatgggttgcaactcggggagtagatgaagaagcaattttg
catggcctacctgctgatcttcgtcgtgacattcaacgacatctatgcctggaccttgtt
cgacgtgtaccatttttctctcagatggatgatcagttacttgatgctatatgtgaacgt
atagtctcgtgcttgagcacagagggtacttacattgtgcgggagggtgatcctgtgaca
gagatgctattcatcattagagggaggcttgagagttgtacgacaaatggagggcggacg
ggtttcttcaatgccattatgttgagacctggagatttttgcggagaggagctccttgct
tgggctttgcacccaaaatctactgtcaacttgcctacctcaactaggacagtgagagca
ctggttgaagtggaagcctttgcattgagagctgaagatctcaagtttgttgctaaccag
tttaggcgactccacagcaagaagctgcagcatacattccggttctactctcaccattgg
agaacatgggcagcatgcttcatacaggccgcttggcgacgacacaagcgaagaatcatg
gcaaaagatcttgctaggatggaatcctttgctttaaatgaaaatgaagcaagagaagag
agtgagcgaggcgaggatactagtacttcgcccacctcaaaccagtccctcacaaagaca
aaccttggtgtcacgatattggcttcaagatttgctgcaaacactaggagaggagctcag
aagattaaagatgtcagtttgcctaaactacaaaaacctgaagagcctgacttttcagca
gaggcggatgactag
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