Ipomoea triloba (trilobed morning glory): 116002024
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Entry
116002024 CDS
T07384
Name
(RefSeq) autophagy-related protein 16
KO
K17890
autophagy-related protein 16-1
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
116002024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
116002024
03029 Mitochondrial biogenesis [BR:
itr03029
]
116002024
Membrane trafficking [BR:
itr04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
116002024
Others
Specific organelles associated proteins
Auto phagosome
116002024
Mitochondrial biogenesis [BR:
itr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
116002024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
DSE1_N
ATG16
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_EML
ANAPC4_WD40
Beta-prop_VPS8
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_SCAP
ASA1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_ACSF4
Beta-prop_NWD2_C
Beta-prop_Aladin
Beta-prop_HPS5
Beta-prop_IFT140_1st
CFAP251_N
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_DCAF4
PAC11
WDR54
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_NOL10_N
Beta-prop_EIPR1
Beta-prop_Vps41
Cytochrom_D1
TolA_bind_tri
PQQ_2
PEP5_VPS11_N
ZapB_rel
Beta-prop_IP5PC_F
Trep_dent_lipo
SYF2
DUF8567
DUF4407
Mis12
Filament
Small_EgtBD
Motif
Other DBs
NCBI-GeneID:
116002024
NCBI-ProteinID:
XP_031097889
LinkDB
All DBs
Position
13:complement(25542011..25547549)
Genome browser
AA seq
507 aa
AA seq
DB search
MEEIAVEAINHALRALRKRHLLEEAAHLPALTALSRPIIHQGSEWKEKAENLEIELQQCY
KAQSRLSEQLVVEVAESRALKAQVQEKEAMITDLQNELNQARDECSSLTALLEEKTKALE
LMISEHQDLKAELDEMTEKANKAESENKMLIDRWMLQKMQDAERLNEANSIYEEMLDKLK
ASSIEQLARQQVDGVVRRSEDGAEYYMESTIPSSCKQRITAHEGGCASTIFEYNSSKLIS
GGQDHTIKMWDTNSGSLSNTLHGCLGSVLDLSITHDNRSIIAASSSNNLYVWDVGTGRIR
HTLTGHKDKVCAVDVGKFSTRHVASAAYDRTIKVWDLMKGYCANTILFHSNCNSLCFSLD
GQTVCSGHVDGNLRLWDFQTGKLLSEVAAHSQAVTSMSLSRNGNVILTSGRDNLHNLFDI
RTLEICGTFKANGNRIASNWSRSCISADDSYVAAGSADGSVHIWSILNGKIVSTLKEHTA
PVLCCSWSGLGKPLATADKSGIVCIWS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaattgcagtagaagccataaaccacgcgctgagggcccttcggaagcggcat
ttactcgaagaagccgctcatcttcctgctttaaccgccctttctcgccctataatccat
caaggctcagaatggaaagagaaagctgaaaatcttgaaatagagcttcaacaatgttat
aaagctcaatctcggttgtcagagcaactagtagttgaagtggccgagtccagagcttta
aaagctcaagttcaagaaaaggaagccatgattactgacctgcaaaatgagcttaatcaa
gcaagggatgaatgttctagcctaactgcacttcttgaagaaaagactaaagctcttgaa
ttaatgattagtgagcaccaggaccttaaagctgaacttgatgaaatgactgagaaggct
aacaaagctgagtcagaaaataagatgttgattgatcgttggatgctgcagaaaatgcag
gatgctgaacgccttaatgaggctaattccatatacgaggagatgctggataaactcaag
gccagtagtatagagcaacttgctcgtcagcaagtagatggtgttgtccgacgaagtgaa
gatggtgcagaatactacatggagtcaactatcccctcttcttgcaagcaaagaatcacg
gctcatgaaggaggctgtgcttctaccatatttgagtataattccagcaaattgattagt
ggagggcaggaccatacaattaaaatgtgggatactaactctgggtcattaagcaacaca
cttcatggttgtctgggctctgttcttgatctttctataacacatgataaccgatcaatc
attgcagctagtagctcaaacaacttgtatgtgtgggatgttggtactggtagaattcgg
catactctcactggccacaaagataaagtatgtgctgtagatgtgggcaaattttctact
cggcatgttgcaagtgcagcttatgatcgtactataaaagtctgggatctaatgaaagga
tactgcgccaatacaattctttttcacagcaactgcaacagcctttgtttcagtctggat
ggacagaccgtttgttctgggcatgtagatgggaatcttcgactctgggattttcaaaca
ggaaaacttctgagcgaagtcgctgcacattcacaggctgtgacatcaatgtccttgtcc
cggaatggaaacgtgatattgacaagcgggagagacaacttgcataatctgtttgatatc
cgcaccctcgaaatctgtggcacattcaaagcaaacggtaaccggattgcatctaactgg
agccgatcatgcatcagtgcagacgacagttatgtagccgctggatctgctgatggatct
gtccatatatggtcaatattgaacggtaaaatagtgagcactttgaaagaacacacagcc
ccggttctatgttgttcctggagtggtcttggcaaacctttggcgaccgccgataagagt
gggattgtatgtatatggtcatga
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integrated database retrieval system
