Ipomoea triloba (trilobed morning glory): 116002074
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Entry
116002074 CDS
T07384
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116002074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
itr03009
]
116002074
Ribosome biogenesis [BR:
itr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116002074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Utp12
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR3_2nd
WDR90_beta-prop_4th
Beta-prop_EML
EIF3I
Beta-prop_ACSF4
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
WD40_Gbeta
Beta-prop_VPS8
PQQ_2
Beta-prop_RIG_2nd
Beta-prop_Aladin
Motif
Other DBs
NCBI-GeneID:
116002074
NCBI-ProteinID:
XP_031097944
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Position
13:28369363..28374739
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AA seq
600 aa
AA seq
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MGSPNIRDFLTAFSPSRDFFAISTGDGRIKIWDTVKGQIQTEFADIESSEVTNMFAKKQE
GHLSMDYTCMKWISMEKKKKRKLGTSILVLGTGGGDVLALDVSAGQLKWRACDCHPGGVT
AISFPKSGRLIYTAGADGMVCELDTMSGNLLQKFKASTKGISSMSISSGGEVLATAASQL
KIVNCSDHKKLQKFSGHPGPVRCMVFSEDGKYLLSSAVGERYIAVWKLGGSKKQSACCLL
AMDHPAVFLESRCIATDADEAGLCVLAISETGVCYFWHGKSAKELRHCKPTKISSDEEML
KKYNGTVPGVFAAKLETVVKPASCHVFLAHGLHVKPSFEKVLLQSGTDLKLNSSLDGLLL
PISQSRKRKLSKSQNQVTALDRANAEGALLPMPHILDLPGAKSGAKLVVSKDDECQYDAD
TVTICMEEQLRSMGIVCDNDDPTSKPTFESDKISGINLEVSIPQKEIKKTVLSMEPSDAC
SLLEMLIAGWHSRLYKAKYILPWIYCIMANHHDYLTSQEPYTHLLDSLYKLTKSKGAALN
SLLQLCGRLQLVTAQFEKATNSQSKMLLRDEQMEESEDEDVEEVRYGLEDESQTSSDNDD
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaccaaatatcagagacttcttgacggccttcagcccttctcgggacttcttt
gctatcagcaccggtgatggtcgtataaagatatgggatacggtgaaaggtcagatacag
actgagtttgcagatattgagtcttctgaggtcacaaacatgtttgctaaaaaacaagaa
gggcacctttccatggactatacttgtatgaaatggatttctatggaaaaaaagaaaaaa
aggaagcttggaacttcaatattggtattgggaactggcggtggggatgttctggcgttg
gatgtatctgctggtcagttgaaatggagagcttgtgattgccatcctgggggtgtcact
gccatatcgtttcctaaaagtggtcggctcatctatactgcaggtgcagatgggatggtt
tgtgaacttgataccatgtccggtaacttgttgcagaagttcaaagcttctacaaaggga
atatcgtctatgtccatttcatcaggtggggaagtattagcaactgcagcttctcagttg
aagattgttaactgttcggaccacaaaaagctgcagaagttttctggccaccctggtcct
gttcggtgtatggtattctctgaagatggaaagtatctgctttcttctgctgttggtgag
agatatattgcagtctggaagttaggtggcagcaaaaagcaatcagcgtgctgtttgctt
gcaatggatcaccctgctgtctttttggaaagtcgatgcattgctactgatgcagatgaa
gcaggcctttgtgttttggctatctctgagacaggtgtctgttatttttggcatgggaag
agtgccaaggagttgcgccattgcaagcccaccaagatatcctctgatgaggaaatgctg
aagaaatacaatggcacagtgcctggtgtttttgctgcaaaattggagactgttgttaaa
cctgcttcttgccatgtgtttctggcccatggtttgcacgtaaagccatcttttgagaaa
gttctgctgcagtctgggacagacctaaagttaaacagttcacttgatggacttcttctt
cccatcagtcaatctcgcaaaagaaaattgtccaaatcacagaatcaagttactgcattg
gatcgtgcgaatgcggagggtgccttacttcctatgcctcatattcttgatttgcctggt
gcaaagagtggagctaagctagtggttagtaaagatgacgagtgccaatatgatgctgat
actgtcacaatatgcatggaggagcaactgagatccatggggattgtttgtgataatgat
gatcccacttctaagccaacttttgaatctgacaaaatcagtggtatcaatcttgaagtt
agtattccgcagaaggagataaagaaaactgttttatctatggaacccagtgatgcatgc
agcttgttagaaatgctgattgctggatggcattccagattgtacaaggcaaaatatatt
cttccatggatatattgtataatggccaatcaccatgactatcttacatctcaggaacca
tatacccatcttctagattccttatataagcttacgaagtctaaaggagcggctctgaac
tctttattgcagctatgtgggcgtttgcaacttgtaacagctcagtttgagaaggctacg
aatagccaaagcaagatgttactacgtgatgaacaaatggaggaaagtgaggatgaagat
gttgaagaagttcgttatggcttggaggatgagtcacaaactagcagcgacaacgatgat
taa
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