Ipomoea triloba (trilobed morning glory): 116002362
Help
Entry
116002362 CDS
T07384
Name
(RefSeq) serine/threonine-protein phosphatase PP1-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116002362
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
itr01009
]
116002362
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
itr03021
]
116002362
03019 Messenger RNA biogenesis [BR:
itr03019
]
116002362
03041 Spliceosome [BR:
itr03041
]
116002362
Enzymes [BR:
itr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
116002362
Protein phosphatases and associated proteins [BR:
itr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
116002362
Transcription machinery [BR:
itr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
116002362
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
116002362
Spliceosome [BR:
itr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116002362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
116002362
NCBI-ProteinID:
XP_031098335
LinkDB
All DBs
Position
13:30217145..30220478
Genome browser
AA seq
326 aa
AA seq
DB search
MDSVALDDIIKRLLEVRGRPGKQVQLSESEIRQLCMQSKEIFLHQPNLLELEAPIKICGD
IHGQYSDLLRLFEYGGLPPKSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN
HECASVNRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALVDEKILCMHGGLSPDLHDLD
QIRSLQRPTDVPETGLLCDLLWSDPSKDVKGWGMNDRGVSYTFGADRVTEFLEKQDLDLI
CRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKPK
FGFGSTTTAKPGTPASKAKSLLGKIG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggattctgtggctctggatgatataatcaagaggttgttggaggttagggggagaccc
gggaagcaagtgcagctttctgagtcggagatcaggcagctgtgtatgcagtccaaggag
attttcttgcaccagcctaatcttcttgaacttgaggcacccatcaagatctgcggggat
attcatggtcagtattctgatctactcaggctctttgaatatggcggtttacctccgaaa
tctaactacttgttcttgggcgattatgtggatcgtgggaagcaaagtctagaaacaata
tgccttctgcttgcgtataagatcaagtatcctgaaaactttttccttctgaggggcaac
catgaatgcgcttctgttaatcgtatatatggattttatgatgagtgcaaacggaggttc
aatgttcggttatggaaaatattcacggattgtttcaactgcctgcccgtggcagctctg
gtcgatgaaaaaatattgtgcatgcacgggggactttctcccgatttgcatgatttggat
cagataagaagcctgcaacgacctacagatgttccggaaactggtttgctttgcgatcta
ttgtggtctgatcctagtaaggacgtcaaagggtgggggatgaatgataggggcgtctcc
tacactttcggtgctgatagagtgaccgagtttctcgagaaacaagatctcgatcttatt
tgccgtgctcatcaggtcgttgaagatggatacgagttttttgcggacagacaactcgta
acaatattctcagctcctaattattgcggggagtttgataatgctggtgccatgatgagc
gttgacgagacgttgatgtgctcttttcaaatattaaagcctgcagagaagaagccgaag
tttggatttggtagcacgacaacggctaaaccaggaacccctgcatcgaaagcaaagtcg
cttctcggtaaaataggatga
DBGET
integrated database retrieval system
