Ipomoea triloba (trilobed morning glory): 116002497
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Entry
116002497 CDS
T07384
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116002497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
itr03021
]
116002497
03036 Chromosome and associated proteins [BR:
itr03036
]
116002497
Transcription machinery [BR:
itr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116002497
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116002497
PBAF complex
116002497
GBAF(ncBAF) complex
116002497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
116002497
NCBI-ProteinID:
XP_031098504
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All DBs
Position
13:complement(20929934..20934673)
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AA seq
574 aa
AA seq
DB search
MEGSREPNFSKLSSDGPPDHDLYTIPSYTSWFSWNNIHEVERLSLGEFFDGNSITRTPRI
YKEYRDFIISKYREDSTRKLTFTEVRKSLVGDICVLQKVFTFLEKWGLINFDPSKPEPVQ
AGAGEEEEEDEKWRVRVEEGAPHGVRVIAAPNSLKPLAPLPPPPSLGVAADAAESGLKMP
PLASYSDVYAELLEQQRREILVCGNCKESCASGHYEYSKEGSFILCEKCFKDGNFDKDKS
ADDFKFIESGDHQVVWTEAETLLLFESVLKHGDDWDLVAQNVKTKNKLECISKLIQLPFG
DLMLGSAHRKNRFCDTNGDVNGLKQAQPASSEPQATMTTEHQPNDCKNEQQNGDNENQEP
PTKRRCSVPISGPSSSLMKQVAHISTVVGPWVTSSATEAAVTALCYENQCSREIFDDSDS
FGDESESSLENNEQERDPQAEGAQIDKTSSDTQDKSSQKSTIPLTLQMRAATAAALGGAA
AHAKLLADQEHREMEYLVSTLVDTQLKKLQRKVKHMEELERIMENQQRQMKELEATILDE
RLDALQGIFSSGSAKSKGDASTIIKSQNNIDAAV
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggagggctcacgcgaacccaacttctctaaactttcctccgacggcccccccgaccac
gatctctacaccatccccagttacaccagttggttttcgtggaataacattcacgaagta
gagaggctgtcactgggagagttcttcgatgggaactcaatcaccaggacgcccaggata
tacaaggagtacagggactttatcatctccaagtaccgggaggattcgacccggaagctc
acattcacggaggtgcggaagtctctggtgggcgacatctgcgtgctccagaaggtcttc
acgttcctcgagaagtgggggctcatcaatttcgatcctagtaagccggagcctgttcag
gccggggcgggagaggaggaggaagaggatgagaaatggagggttagggttgaggaaggg
gctccccatggggtgagggttattgcggcgcctaattcgctcaagcctcttgctccgctc
ccgccgccgccttcgttgggcgttgccgctgacgcggcggagagtgggctcaagatgccg
ccgctggcgtcgtattccgatgtttatgccgagttgttggagcagcagaggagggagatt
ttggtgtgtggcaactgcaaagagtcgtgtgcctctgggcactacgaatatagcaaggaa
gggagctttatcttatgtgaaaagtgcttcaaagatggtaattttgataaggataagtct
gcagatgactttaagttcattgaaagtggcgaccaccaggttgtctggaccgaagcggaa
actttactcctatttgagtctgtactgaagcatggagatgactgggatcttgttgcccaa
aatgtgaaaacaaagaacaaacttgaatgtatctcaaagcttatacagcttccctttggt
gatcttatgctgggatctgcccatagaaagaatagattttgtgatacaaatggtgatgta
aatggtttgaaacaagcacagcctgcttcaagtgaaccccaagcaactatgacaacagag
catcaacccaatgactgtaagaatgagcaacaaaatggagataatgaaaaccaagaacca
cctactaagagaagatgcagtgtgccaatttcaggacctagcagttctttaatgaaacag
gtagcacacatctctactgttgttggtccatgggttacttcttctgcaactgaggcagct
gttacagcactttgctatgaaaaccagtgttctagggagatttttgatgacagtgatagt
tttggggatgagtcggaatcttcccttgaaaataatgagcaagaaagagatcctcaagca
gaaggtgctcagatagacaaaacgagttcagacacacaggataaaagctcccagaagagt
acgatacctctgacgttacaaatgagggctgccactgcagccgctcttggtggcgctgcc
gctcatgccaaattattggctgatcaggaacacagagagatggaatatttggtttcaact
ttagttgatacccagcttaagaagttacagcgcaaagtcaaacacatggaagaactggag
cggataatggaaaatcagcaaaggcagatgaaggaactagaggccactatactggatgaa
cgtttagacgctttgcaaggaatatttagtagcgggagtgcgaaatctaagggcgatgct
tctacgattatcaagtctcagaataatattgatgctgctgtttga
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