Ipomoea triloba (trilobed morning glory): 116002576
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Entry
116002576 CDS
T07384
Name
(RefSeq) ABC transporter E family member 2-like
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
itr03009
]
116002576
Ribosome biogenesis [BR:
itr03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
116002576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_22
AAA_15
Fer4_6
AAA
RsgA_GTPase
AAA_23
AAA_29
Rad17
NACHT
Fer4_9
DUF5906
Fer4_2
Fer4_21
TsaE
nSTAND3
NPHP3_N
VapE-like_dom
AAA_33
SRP54
Fer4_10
AAA_5
Fer4_4
ORC-CDC6-like
AAA_24
Fer4_16
AAA_19
Fer4_7
Fer4_17
Mg_chelatase
AAA_13
Motif
Other DBs
NCBI-GeneID:
116002576
NCBI-ProteinID:
XP_031098603
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All DBs
Position
13:complement(22008270..22013366)
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AA seq
606 aa
AA seq
DB search
MSDQRLTRIAIVSSDKCKPKKCRQECKKSCPVVKTGKLCIEVAPASKIAFISEELCIGCG
ICVKKCPFEAIQIINLPKDLNKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTA
LKVLAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKA
VQGNVGQVLEQKNERDVKTELCLDLELNKVLDRNVGDLSGGELQRFAIAVVAIQNAEIYM
FDEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVV
TLPFSVREGINIFLAGFVPTENLRFRDESLTFKVAETPQESAEEIETYARYKYPTMTKTQ
GNFKLKVMEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVESSDAEIPEFNVSYKP
QKISPKSQSSVRHLLHQKIRDSYTHPQFNSDVMKPLQIEQLMDQEVVNLSGGELQRVALA
LCLGKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFVVEHDFIMATYLADRVI
VYEGMPSVDCTANSPQSLLTGMNLFLSHLDITFRRDPTNYRPRINKLESTKDREQKAAGS
YYYLDD
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatcagaggttgacgcgtattgcaatcgtcagctccgacaagtgcaagcccaag
aagtgccgtcaggaatgcaagaagagctgccccgttgtgaaaaccggcaaactttgtatt
gaggttgctcctgcatccaagattgctttcatctcagaggagttgtgcattggatgtggt
atttgtgttaagaaatgcccatttgaagcaattcagattataaatctgccaaaggacttg
aacaaggatactacccatcgttatggtcctaatacgttcaaattgcacagattgccagtt
ccaagacccggacaagttcttggcttggtaggaacaaatggtattggcaaatcaactgcg
cttaaagttttggctgggaaactaaaaccgaatttagggcgcttcaataaccctccggat
tggcaggagatattgacttatttccgaggttctgaattacagaattactttactcgtatt
ttggaagacaatctaaaggctattatcaaacctcaatatgttgaccatattccaaaagct
gtccaaggaaatgtggggcaagtccttgaacaaaagaatgagagagatgtcaaaacagaa
ctttgtctcgatcttgaattgaataaggttttggaccgtaatgtaggagatttgtctggt
ggagagcttcaacgattcgctattgctgttgttgctatacaaaatgcagaaatttacatg
tttgatgaaccatcaagctatcttgatgtgaagcagagactcaaagctgctcaagttgtc
agatctttgctccgacccaacagctatgtaatagtcgtggagcatgatttgagtgttctt
gattatctgtcggatttcatctgctgcctatatgggaagcctggggcatatggtgttgta
acccttccattctctgttagagaaggaattaacatattcttggcagggtttgtgccaaca
gaaaatcttcgattccgtgacgaatctcttacttttaaggtcgctgagaccccacaggaa
agtgcagaggaaattgaaacatatgcacggtataaataccctaccatgacaaagacgcag
ggtaatttcaagctgaaggttatggaaggtgaatttaccgactctcagattattgtaatg
cttggtgagaatggaactgggaagacaacatttatccgcatgctggctgggttgctgaag
cctgacagtgttgaaagctctgatgcggagattcctgagtttaatgtctcctacaagcca
caaaaaattagtcccaaatctcaatcttcggtgagacatttgctacatcagaaaatacgt
gattcttatacccatcctcagtttaactcagatgttatgaagcctctgcaaattgagcaa
ttgatggatcaagaagttgtgaacttatctggtggagagttgcaaagagttgccttggct
ttgtgtcttgggaagcctgccgatatttatttgattgatgaacccagcgcatatctagat
tctgagcagcgtatcgttgcttcgaaagttataaagaggtttattcttcatgcaaagaag
accgcgtttgtggtggaacatgacttcataatggcaacctacttggctgacagagtgatc
gtgtatgaagggatgccatcggtggattgtacagcaaattcaccacagtcattgttgacc
ggaatgaacctattcttatctcacctggatattacgtttagacgggatccaactaattat
cgcccaagaatcaacaaacttgagtcaaccaaggacagggagcaaaaggcagcaggatca
tactattacctggatgattaa
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