Ipomoea triloba (trilobed morning glory): 116002842
Help
Entry
116002842 CDS
T07384
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116002842
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116002842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
116002842
NCBI-ProteinID:
XP_031098868
LinkDB
All DBs
Position
13:complement(31840097..31841837)
Genome browser
AA seq
454 aa
AA seq
DB search
MAGFNINSFCILFVTFAIIFPTILGHIAEFDEVWQQRKIEAWEHALRTFEPDPNNVTAAF
NHEVHRTLLDSENELAKKNDNVSDDTRRQLGTKHKHYHGPCNATNPIDRCWRCQANWANN
RKRLADCGMGFGRKAIGGKHGGFYIVNDNSDNPMKPKPGTLRHAVIQKQPLWIIFGRSMN
IRLIQELMVTSHKTIDGRGAQVHISGGAGITLQFVKNVIIHGIRVHDIVEGSGGMVRDSV
DHFGLRTKSDGDGISIFGSSDVWVDHVSMKNCYDGLVDAIEASTGVTISNGHFTDHNEVM
LFGANDWSPKDKIMQITIAFNHFGKRLVQRMPRCRFGYIHVVNNDYTHWNMYAIGGSADP
TIISQGNRFIAPLDIHKREITHRAAGTPQQWKQWTWRSQGDIYMNGAFFVQSGDPNFMSK
HNQLYDGVKTFKATEVTWLTRFAGALNCKPGAPC
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggccgggtttaatatcaattctttttgcatcttgtttgttacttttgccataatattc
cccaccatcttgggtcacattgctgagttcgacgaggtgtggcaacagcgtaaaatagaa
gcctgggagcacgccctcagaacattcgagcccgatcctaataacgttactgctgcattc
aatcacgaagttcacaggacgttgttggattctgaaaatgaattagccaaaaagaacgat
aatgtatcagacgacacaaggaggcagctaggtacaaagcataagcattaccatggaccg
tgtaatgccacaaacccaatcgaccgttgctggcgttgccaagccaattgggctaacaac
cggaagagattggccgattgcggaatggggtttgggcgcaaagccataggcggcaagcac
ggcggtttctacatcgttaatgacaactctgataatcctatgaaacccaaacctggaact
ctccgacatgcggtgatccaaaagcaacccttgtggataatctttggacgaagcatgaac
atcagacttatccaagagttgatggttacaagccacaagactatcgatgggcgtggggcc
caagttcacatcagtggtggggccgggatcaccctccaattcgtgaagaacgtcatcatc
catggcatccgtgtccacgacatcgtcgaaggtagcggtggcatggtcagagactcggtc
gaccactttggattgcgaactaagagcgatggcgacggtatttccatctttggttcttcg
gatgtttgggtagatcacgtgtccatgaagaactgttatgacgggcttgttgacgccatt
gaagcatccaccggcgtcactatttcaaacggccacttcaccgaccacaacgaggtaatg
ttgtttggtgcaaatgattggtccccaaaagacaaaatcatgcaaatcaccattgctttc
aaccacttcgggaagagattggttcaaagaatgccgaggtgccgatttggatatatccat
gtggtgaacaacgattacacacattggaacatgtacgccattggaggtagtgcggacccc
accatcattagtcagggtaacaggttcatcgctcccctagacattcacaaaagagaaata
actcacagagctgcggggactccacaacaatggaagcagtggacatggagatcacaagga
gatatatacatgaatggagctttctttgttcagtctggggatccaaatttcatgtcaaag
cacaatcaattgtatgatggtgtaaagacatttaaagcgacggaagtgacttggcttact
aggttcgcaggggcactgaattgcaagccaggagcaccctgttag
DBGET
integrated database retrieval system
