Ipomoea triloba (trilobed morning glory): 116003083
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Entry
116003083 CDS
T07384
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116003083
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116003083
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Toxin_YhaV
Motif
Other DBs
NCBI-GeneID:
116003083
NCBI-ProteinID:
XP_031099119
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Position
13:24594718..24599632
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AA seq
448 aa
AA seq
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MGSEKKWLSVALTSLLLLLSVAGAFAGMQNSKDSEMRNLQKEEPQSLQNLTMAARLAHME
ETLSKHAVDDPEEVAFMVTESIKNSTERRKLGFFSCGTGNPIDDCWRCDPNWHKNRKRLA
DCGIGFGRNAIGGRYGRFYVVTDPGDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVITLK
QELIMNSFKTIDARGTNVHIANGACITIQFVTNIIIHGLHIHDCKPTGNAMVRSSPSHFG
WRTMADGDGVSIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITISNNHFAHHNEVMLLGH
SDSYTRDKQMQVTIAYNHFGNGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINS
QGNRYLAPSNPFAKEVTKRVDTAQNQWKGWNWRSEGDLMLNGAYFTPSGAGASASYARAS
SLGAKSSSMVGMMTSNAGPLACRKARTC
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggggtccgagaagaagtggctctccgtcgctctcacttctctgctgcttctcttgtcc
gtcgccggcgccttcgccggaatgcagaatagtaaagactccgagatgaggaatttgcag
aaagaagaaccgcagagcttgcaaaacttaacaatggcggcaaggttggcacacatggaa
gaaactcttagtaagcatgcagtggatgaccctgaagaggtcgccttcatggttacagag
agtatcaagaacagcacagagaggcgaaaactgggatttttctcgtgtgggactggaaac
cccattgatgattgctggagatgtgatcccaactggcacaagaaccgtaagcgcctcgca
gattgtgggattgggtttgggcgcaatgctatagggggcagatatggtcgattctatgtt
gtgactgatcccggcgatgatgaccccgtgaacccccggccgggcactctccggcacgcc
gttatccaggacaggccgctctggattgtgttcaagcgggatatggttataacgctgaag
caggagctgattatgaacagcttcaagactattgatgcacggggaaccaatgtgcatatt
gctaatggggcctgcattacaatccagtttgtgaccaatatcataatacatggccttcac
atccatgactgtaagcccactggaaacgccatggtcaggagctccccgtcccatttcggt
tggaggactatggcggatggcgatggcgtttccatcttcggctcgagccatatttggatc
gatcacaactcgctctctcactgcgctgatggccttgtggatgctgtcatgggctccact
gccattactatctccaacaatcattttgctcaccacaatgaggtgatgctgttgggtcat
agtgactcttacacgagagacaagcaaatgcaggtgacaattgcctataatcactttggg
aatgggctcatacagagaatgccaaggtgcagacatggttactttcatgtggtgaacaat
gactacactcactgggaaatgtatgccattggtggaagtgctaaccctaccatcaatagc
caaggaaaccggtaccttgctccatccaatccttttgccaaggaggtgacaaagagagtt
gacactgcccagaatcaatggaaggggtggaactggagatcagagggagacttaatgctt
aacggtgcatacttcaccccctccggcgcgggtgcctcggccagctacgccagagcttcg
agcttgggtgccaagtcgtcttctatggttggcatgatgacgtcaaatgccggtcccctg
gcttgccgcaaggcccgcacatgctaa
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