Ipomoea triloba (trilobed morning glory): 116003177
Help
Entry
116003177 CDS
T07384
Name
(RefSeq) (-)-germacrene D synthase-like
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
116003177
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
116003177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
DUF4897
Motif
Other DBs
NCBI-GeneID:
116003177
NCBI-ProteinID:
XP_031099201
LinkDB
All DBs
Position
13:31547066..31549678
Genome browser
AA seq
562 aa
AA seq
DB search
MAAINQPLSVLTSNSPQLHEVTRRSANYHPSVWGDHFLAYASHEKKAEAQEWQEHQQLKE
KVKNMIVKAPCISSQKLELINKIQRLGVSYQFEKEIEATLQLIFKNYYEFNVEKDENELY
VVSLHFRLLRQHGYHVPCSVFEKFTEYDGKFKESLTNNVEAILSLYEASHLRVKGEKILD
EALIFTTSRLKSMLPNLTDPLRSQVNEALKRPIYKRLTRIEARRYISIYEANETHDIVLL
KFAKLDFNMLQKEHQQELGNLTRWWKTLDVPKNLPFARDRLVECYFWMLGVYFEPQYSLA
RMFLLKVISITSLMDDIYDVYGTLDELHLFTEAIQRWDAVLVNELPEYMRVCYVALLDVY
AEMEKELAVKGESYRINYAKNEMKKLVGAYYEEAKWFHNRCTPKFEEYMKVSLVTGAYMM
LSTTSIVGMQGDIVTKEALDWVSKEPLIVQAACIICRLMDDMAGHEFEQQRGHVDSAVEC
YMKQYGKSKEETFNEFQERVSNAWKDINQECLNPTAFPMPILIRVVNLARVMDLLYKDGD
TYTHSSTETKDIITSVLIDPII
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggctgccattaatcaaccattatctgttcttacatcaaactcccctcagttgcatgaa
gttactcgtcgttctgccaattatcatccaagcgtttggggtgaccatttcctagcttac
gcttctcatgaaaagaaagcagaagcacaagaatggcaagagcatcaacaactgaaggaa
aaggtgaagaacatgattgtgaaagccccatgcatttcttcccaaaaattggaattgata
aacaaaatccaacgattgggagtgagctatcaatttgagaaggagattgaagcaacgctg
caactcatattcaagaactattacgaattcaatgtcgaaaaagacgagaacgaactttat
gttgtttctctgcactttcgactacttagacaacacggctatcatgtaccttgcagtgtg
tttgaaaagttcactgaatatgatggaaaattcaaggaatcattgaccaacaatgtggaa
gcaatcttaagtttatacgaggcgtcacatcttagggtgaaaggggagaagattttggat
gaagcactcatatttactacttctcgcttaaaatccatgttaccaaatctgaccgatcct
cttagatctcaagtcaatgaagcattaaagagaccaatttacaaaagattaacaaggata
gaagcaagaagatacatatcaatttatgaagctaatgaaactcatgatattgtattgttg
aaatttgcaaaactggacttcaacatgctacagaaggaacatcagcaggagctaggcaat
cttaccaggtggtggaagacattagatgttcccaaaaatctacctttcgccagggataga
ttggtggagtgctacttttggatgttaggagtgtactttgaaccacagtattctcttgcc
agaatgtttcttcttaaagttatatcaataacttcacttatggatgatatttatgacgtg
tatggaactcttgacgagctccacctattcacagaggcaatccagagatgggatgcagtt
cttgtaaatgaattacccgaatatatgagagtttgttacgttgctcttctcgatgtttat
gctgaaatggagaaagagttagctgtcaaaggtgaatcataccgtatcaattatgccaaa
aatgagatgaaaaagttagtgggagcatattatgaagaagcaaagtggtttcataatcgt
tgcactccaaagtttgaggagtacatgaaggtttctcttgtaacgggcgcttatatgatg
ctatcaacaacttctatagtaggcatgcaaggagatattgtaactaaagaggcccttgat
tgggtgagtaaggagccattaattgttcaagcggcatgtattatttgtagattaatggat
gatatggctggacatgagtttgagcaacaaagaggacacgtagattcagctgtagaatgc
tacatgaaacaatatgggaagtcaaaggaagagacctttaacgagtttcaagaacgagtt
agcaatgcatggaaagacattaatcaagaatgtcttaacccaactgcttttcccatgcct
atactcatccgagttgtcaacctcgcaagagttatggatctattgtataaagatggagat
acatatacacattcctcaaccgaaactaaagacatcattacctctgtgttaattgatccg
atcatatga
DBGET
integrated database retrieval system
