Ipomoea triloba (trilobed morning glory): 116003516
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Entry
116003516 CDS
T07384
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
116003516
Enzymes [BR:
itr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116003516
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116003516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-rbx1
zf-RING_10
Prok-RING_4
zf-ANAPC11
Zn_ribbon_6
zf-RING_4
zf-Nse
TRAF3_RING
Sina_RING
Motif
Other DBs
NCBI-GeneID:
116003516
NCBI-ProteinID:
XP_031099267
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All DBs
Position
14:complement(21827368..21829958)
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AA seq
221 aa
AA seq
DB search
MSTQEQRAHPHRYTRGFQRRKRLLNVDLNAVPSWENLDHEGTSAPVVSQDVPPGQRVASL
TSETIDIDGLDDDDDVVIISSPRALAEAKNNSMRNRRQTVVVNVDSEEHLPRVPPHNTYK
RRRVPTYQSVINLEGYSNSKGDNDPSVTFVAVAPPPPPPKEPTFSCPVCMGPLVEEMSTK
CGHIFCKACIKASIAAQGKCPTCRRKITMKGTIRVYLPATS
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcaggagcaaagggctcatcctcacaggtacacaagggggtttcagaggagg
aagaggttattaaatgttgatctcaatgctgtgccatcatgggagaacctggatcacgag
ggaacttcagctcctgttgtttctcaagatgtgccacccggtcaaagagttgcttctttg
acatctgaaacaattgatattgatgggcttgatgatgatgatgatgttgttattatatcc
tctcctcgtgcacttgctgaggctaaaaacaactccatgaggaatcgtcggcagactgtt
gtggttaatgtggattctgaagagcatttgcctagggtcccacctcataacacctacaag
cgcagaagagttcctacatatcagtcagttataaaccttgaaggatatagcaactcaaag
ggagataatgacccaagtgtgacatttgtagcggtagctccacctccacctccaccaaag
gagccgacattcagttgtcccgtttgcatgggtccattagtcgaggagatgtcaaccaag
tgtggccatattttttgtaaggcgtgtatcaaagcttccatagctgctcagggtaaatgc
cctacttgtaggaggaagattaccatgaaaggcaccataagagtttacctgcctgccaca
agctga
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