Ipomoea triloba (trilobed morning glory): 116004188
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Entry
116004188 CDS
T07384
Name
(RefSeq) DNA polymerase lambda-like isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03410
Base excision repair
itr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116004188
03450 Non-homologous end-joining
116004188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
itr03400
]
116004188
Enzymes [BR:
itr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116004188
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
116004188
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
116004188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
BRCT
NTP_transf_2
PTCB-BRCT
HHH_5
DUF5751
Motif
Other DBs
NCBI-GeneID:
116004188
NCBI-ProteinID:
XP_031099996
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All DBs
Position
14:3923635..3929016
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AA seq
535 aa
AA seq
DB search
MAPKKIKSPPSDPQGMFSRMVVFLVEDGVQTRRLQIWKQRLTQMGASIQGTFSKNVTHVF
AVDANSLLKKVDHQRLIRSKAKMLLYQWVQDSLTKGEKVPEDLYIVSLESGENKEICKED
NRSDCTNSEFTQKKSRISFEGSNIVNQEKKVDTKDHFGHQLVDTANSSECSSRSSSPEII
SEAVFYPCDEAAETSKSSLLYEPPNLNRNITTIFGKLVDIYRALGDDRRSFSYHKAIQVI
EKLPFKIETIDQVKNLPTVGRSLQEHIQEIVNTGKLSKLQHFEKDEKVRTISLFGDVWGV
GPATALKFYEKGHRTLDDLKTEESLTNAQRLGLKYFEDIKTRIPRREVEEMDKLLQKVGQ
EILPGVIIVCGGSYRRGKSSCGDMDIVITHPDGKSHVGFLPRFVKRLKEMKFLREDLIFS
IHSEEGTESGVDTYFGLSTYPGQELRRRIDLKVYPRNIYAFGLVHWTGNDVVNRRLRILA
QAKGFRLDDTGLFPSTQGSEGKQGGIKRANLKLDTEKEIFDFLGFPWLEPHERNL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaaagaagatcaaatctccgccctctgatcctcagggaatgttcagcagaatg
gtggtcttcttagtcgaagacggagtccaaactcgtcggctacagatatggaagcagaga
ttgacgcaaatgggggctagcatacagggcactttttctaaaaatgtgactcatgttttt
gccgtggatgcaaattctcttcttaagaaagttgatcaccagcggttaattaggtcaaaa
gctaaaatgctcctatatcagtgggtgcaggacagcttgacaaagggagaaaaggtgcct
gaagatttgtatatcgtatccctagaatcaggggaaaataaagagatctgtaaggaagat
aacagaagtgattgtactaatagtgaatttactcaaaaaaagagcagaatctcttttgag
ggtagcaatattgtgaatcaagaaaaaaaggttgacacaaaggaccactttggacatcag
ttagtagatactgcaaacagctctgaatgttcatcacgctcatcaagcccagaaatcatt
agtgaggcggtcttttatccttgtgatgaggctgctgaaacatcaaaatcatcattgctt
tatgagcctcccaatttaaacaggaatattaccacgatatttggaaaacttgttgacatt
tatagggcacttggtgatgatcgaaggtcatttagctatcacaaagccatccaagttatt
gagaaactgcctttcaaaattgagactatagaccaagttaaaaaccttcctactgtagga
aggtcattgcaagaacatattcaggaaatagtgaacactgggaagctctccaaattgcag
cactttgagaaggatgaaaaggtacggacaatcagcttgtttggagatgtttggggtgtt
ggtccagcaactgccttaaaattttatgagaaagggcatcggactctagatgacctaaaa
actgaagaatcattaacaaatgcccagagattaggcttgaaatattttgaagacatcaaa
acaagaattccgcgtcgggaggttgaggagatggataaacttctacagaaggttggacaa
gagattttacctggggttattattgtgtgtggaggatcatatagacgtggaaagtcatct
tgtggggatatggacattgttattactcatcctgatggaaagagtcatgtaggttttctt
cctcgttttgtaaagcgtctcaaagaaatgaagtttttgagggaagatttgatcttcagt
attcacagtgaagagggtacagaatcaggagtagacacctattttggtctttccacctat
cccggtcaagagctgcgacgtcgcattgacttgaaggtgtatccaagaaatatatatgca
tttgggctagtacattggacggggaatgatgttgtgaacaggcggcttcgaatattagca
caggccaagggtttccggttggatgatacggggttattcccttcaactcaaggttctgaa
gggaaacagggtggtataaaacgcgctaatttaaagctcgacacagagaaggaaatattc
gattttcttggttttccttggcttgaaccacatgaaagaaatttatga
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