Ipomoea triloba (trilobed morning glory): 116004374
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Entry
116004374 CDS
T07384
Name
(RefSeq) paired amphipathic helix protein Sin3-like 3
KO
K11644
paired amphipathic helix protein Sin3a
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
itr03036
]
116004374
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
116004374
REST complex
116004374
Heterochromatin formation proteins
Other heterochromatin formation proteins
116004374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
116004374
NCBI-ProteinID:
XP_031100259
LinkDB
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Position
14:3831950..3842500
Genome browser
AA seq
1349 aa
AA seq
DB search
MKRSRDELYMSPPKRPINSSRAELPVQQQMMSGNGMQKLTTGDALAYLKNVKDIFQDKRD
KYDEFLEVMKDFKAQRVDTSGVIARVKDLFKGHQNLILGFNTFLPKGYEITLQSDDESQP
PPIKKPVEFEEAISFVNKIKTRFQGDDSVYKCFLGILNMYRKENKSISEVYQEVSSLFHE
HPDLLVEFANFLPDTSATTQVNRTHILRRDDKIAPIIMGKPAEKRANALHADHGHGLDRS
DPEQCRPERRERGFDEKELDKKSAFREDSIAGHFNQGVVDQDLMFFDNIKERLQNSDDYQ
QLLKCLHTYSGETITKEQLLSLVSALLGGHADLMGGFNEFITRCDNIGDGYLTATLNKRS
LWNDGKVPRLVKSEDRDRDRDCELEERNQDRDTRERDRLKELHGQKMFSSKDKYIAKPIH
ELDLSNCERCTPSYRLLPKNYPNPIASQRTEIGKEVLNDRWVSVTSGSEDYSFKHMRKNQ
YEESLFRCEDDRFELDMLLESVNVTTRRVEELLDKINDNTINSDSPVRVEDYLTALNLRC
IERLYGDHGLDVMDVLRKNAPLALPVILTRLKQKQEEWARCRYDFNKVWAEIYVKNYHKS
LDHRSFYFKQQDTKSLSTKALLAEIKEIGETKCKEDDVLLSMATGNRLPVIPHLEFAFPD
PDIHEDLYQLIKFSCEEFCTAEQVDKVMKVWNTFLEPMFGVPSRPQGAEDGECIEKECNQ
VVESIAGAVGDTEGSPASASGTAINSRQSNASKNRDEGPPPENSSSSRVCLADTGDLVKD
NGSRGVDISAGRIDTLCNPSHLGKSPSRPSGANMVDATSAEQLAHLSATAGKETAGRIGR
ENTSALQNLPSLTRLCATGVPPRASDLAVDSGHEIRTWKEPKEVSFTKAVQDGNEAKKSH
EHSVEKLKIEREEGELSPNDDFEDNFGASNESEVETAHTTKDTTTNKQYQTGDREETCGR
VAGGENDADADDEGDESAQRTSEDTGNASEHGDVSGSESADGEGSHDEPDEDGDHDENEN
KAESEGEIEGMDDVHDTEGDGVPLPLSVRGIQTAKPLTMLVPSSLHDKDGLRIFYGNDSF
YVLFRLHQTLYERMHKAKLHSSSVENRWRVSNDANPTDIYARFMTALRNLLDGSSDNAKF
EDDCRAIIGAQSYLLFTLDKLIYKLVKQLQTIATDEMENKLLQLYMYEKSRNSSVSFDVV
YHENVRVFLHDENIYRIQCSSSPAQLSIQLMDYGYDKPEATGVVMDPNFAAYLSNDLLLC
APEQKGIPGVFLKRNRQKYGSRDETSATLEAIAGLKVLNGLECKIACKSLKVSYVLDTED
SMFRMKKRRRTLHQSVPFNSHPNSLNGSH
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtctagagatgaactgtacatgagccctcctaaacgccctattaactcttct
cgtgccgaactgcctgtgcaacaacagatgatgagtggaaacggcatgcagaagctaaca
acaggtgatgcccttgcatatctcaagaatgtgaaggacatctttcaagacaaaagagac
aaatatgatgagtttcttgaagttatgaaagatttcaaggctcaaagagttgacacatct
ggtgtcatagcaagggtgaaggatctgtttaaagggcatcaaaacctaattttgggattt
aatacctttttgccaaagggatatgagatcacccttcaatctgatgatgaatcacaacca
cctccaataaaaaaacctgttgaatttgaagaagcaataagttttgtaaacaagataaag
actagatttcaaggtgatgattctgtatataaatgtttccttggcattctgaatatgtat
agaaaggaaaacaaatcaatctcagaggtttaccaagaggtttcttctctttttcatgaa
caccctgacttgcttgtggagttcgccaattttttaccggatacatcagcaacaactcaa
gtcaacagaacccatatcttgcgtcgtgatgataaaatagcacctataatcatgggaaag
cctgctgaaaagagggccaatgctttgcatgcagaccatggccatggtctggatcggtct
gacccagaacagtgcagaccggaaagaagagaaaggggttttgatgagaaggagttggac
aagaagtctgcctttagagaagattccattgccggtcattttaaccaaggtgtggtcgat
caagatttaatgttctttgataatattaaggaaagattgcagaactctgatgattaccag
caacttctaaagtgtcttcacacatattctggagaaacaatcacaaaagaacagttgcta
tccctggtcagtgccttacttggaggacatgcagaccttatgggaggtttcaatgaattt
ataacccgttgtgataatataggtgatggttaccttactgctactctgaataaaagatcc
ctatggaatgatgggaaagttcccagattggtgaagtcagaagacagggatagagaccgg
gattgtgagttggaagagagaaatcaagatcgtgatactagagaaagggatagacttaaa
gaattacatgggcagaagatgttttctagcaaggataagtatattgcaaaacctatacat
gaacttgacctctctaactgtgaacgctgcactcccagttatcgacttctcccaaagaat
tatccaaatccaatagcaagccagaggacagagataggtaaagaggtattgaatgatcgt
tgggtatctgtaacttctgggagtgaagattactcttttaagcatatgcggaaaaaccaa
tacgaagagagcctgtttcgatgtgaagatgacaggtttgagctggatatgctgttggaa
tccgtgaatgttactacgagacgtgttgaagaattgcttgacaagatcaatgataataca
ataaatagcgacagtcccgttcgggttgaagactatctcaccgctctaaacctaagatgt
attgaacgcctgtatggtgatcatgggcttgatgttatggatgtgttgaggaagaatgca
cctcttgctctgccagtaattctaacacgattgaaacagaaacaagaggagtgggcaagg
tgtcgttatgactttaataaagtctgggctgaaatttatgttaaaaactatcataaatcg
ctggatcatcgtagcttttatttcaagcagcaggacacgaagagcttgagtaccaaagca
ttattggctgaaatcaaagaaatcggtgaaacaaagtgcaaagaggacgatgtgcttctt
tctatggctactgggaatagactgccagtaattcctcatttggaattcgcatttcctgat
cctgacatccatgaggacctttatcagctcataaagttttcgtgtgaagaattttgcaca
gctgaacaggttgataaagttatgaaggtttggaatacttttctggaaccaatgttcgga
gttcctagtcgtcctcaaggcgccgaggacggagaatgcattgaaaaggaatgcaatcaa
gttgttgaaagtatcgctggagctgttggagatacagaagggagtcctgctagcgctagt
ggcacagcaattaattccagacaatcaaacgcttccaaaaatcgcgatgaaggccctcca
cctgaaaactcaagttcatccagagtttgcttggctgatactggtgatttagtcaaagat
aatggttctcgtggtgtagatatttctgcaggtaggattgatactctatgtaacccatct
caccttggcaagtcaccaagccgtccaagcggtgccaacatggttgatgcgacttctgct
gagcagctagcccatttaagtgccactgctgggaaggaaaccgctgggagaattggtaga
gaaaatacttctgctttgcaaaatcttcctagtttaaccaggctttgtgccactggagtc
cctcccagagcaagtgatttggctgttgatagtggacatgagataagaacttggaaagaa
ccaaaggaggttagcttcacgaaagcagtgcaagatggcaatgaagctaaaaaatctcat
gaacattctgttgaaaaactaaaaattgagagagaggagggcgaattatctccgaatgat
gattttgaggacaattttggtgcgagtaacgagtctgaagttgagacggcacatactaca
aaggatacaaccactaacaaacagtaccaaactggagatcgagaagaaacttgtggtaga
gtggctggaggtgaaaacgacgctgatgcagatgatgaaggcgacgagagcgctcagagg
acatcggaggacactggaaatgcatctgaacacggggatgtttcaggaagtgagtctgct
gatggagaaggctctcacgatgaacctgatgaagatggggaccatgacgagaatgaaaac
aaggccgagagcgaaggggaaatcgaaggaatggatgatgttcatgatactgaaggagat
ggcgttccattgccattgtcggtgcgtggtatacagaccgctaagcctctcaccatgcta
gttccttcgtcattgcatgataaggatgggttgagaattttttatggaaatgattccttc
tatgtgctcttcagacttcatcagacattgtatgagagaatgcacaaggcaaagttgcat
tcttcgtcggttgagaacagatggagagtgtcaaacgatgcaaaccccactgatatatat
gctagatttatgactgcacttcggaatctgctcgatggttcctctgacaatgcaaagttt
gaggatgattgccgagctattattggagcccagtcctatcttctcttcaccttggataag
ctgatatataaattggtcaagcagctccaaacaattgcaactgatgagatggagaacaaa
cttcttcagttatatatgtatgaaaagtcgagaaactctagcgtgtctttcgatgtggtt
tatcatgaaaacgtgcgtgtttttcttcatgatgagaacatttatagaatacaatgctca
tcatcaccagcgcagttgtccatccagctcatggactacgggtatgataagcctgaagca
actggtgttgttatggaccctaactttgctgcttatttgagcaacgatctactcttgtgt
gctcccgagcaaaagggaatccctggggtgttcttgaagagaaatagacaaaaatatgga
tcccgggatgaaacctctgctacacttgaggcaatagcgggacttaaagttctgaatggt
ctggaatgcaagatagcttgcaagtcattgaaggtctcgtatgttttggacaccgaagac
tcgatgttcaggatgaagaaacggaggagaacactgcaccagagtgtcccgttcaacagc
cacccgaattctttgaatggatcccattga
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