KEGG   Ipomoea triloba (trilobed morning glory): 116004479
Entry
116004479         CDS       T07384                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116004479
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:itr03019]
    116004479
   03041 Spliceosome [BR:itr03041]
    116004479
Messenger RNA biogenesis [BR:itr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     116004479
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     116004479
Spliceosome [BR:itr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    116004479
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 PHM7_cyt
Other DBs
NCBI-GeneID: 116004479
NCBI-ProteinID: XP_031100404
LinkDB
Position
14:complement(16871540..16874572)
AA seq 472 aa
MAKKRKSRASHQPEPQPQPEPEPEQVKVEEQEQSQPEVDPEPEATNQVAEEEKEQEKEVG
EQMEVEDLNGNSNGAEKGKGNCSDDAGTANGGEEEEEEEEDLEEEPLEKVLEPFSKEQLK
VIVQEAVNKHPDFIKNVTAWADKDPSHRKIFVHGLGWDATAETLTNVFANYGEIEDCKAV
TDKVSGKSKGYAFILFKHRSGAKKALKQPQKKIGNRMASCQLASSGPGPGPAPPPNTPPV
SDYTQRKIFVSNVSADFDPQKLLAFFSKYGEIEEGPLGLDKISGKPKGFCLFVYKTVESA
KKALEEPNKIFEGQELNCSKAIDGPKQNKNFHQHQHHHKQQQYYQHTAKKGKYSAGGVGS
AATSTGHLIRPQPGPAPVGFNPAVAPVLGQALTALLATQGGGLGIGNFLGGLGPVNPQGV
PPGMNNSTGYGVQGAAAGYGVQPGMQGGYQYPQMGHGGVRPHGGAPYMGRGR
NT seq 1419 nt   +upstreamnt  +downstreamnt
atggccaagaagcgaaagtctcgggcttcacaccagcccgaacctcaaccccaaccggaa
ccggaaccggaacaagtcaaagttgaagagcaagagcagtcgcaaccagaagttgatccc
gaaccggaagcaaccaatcaagtggccgaagaagagaaggagcaagagaaagaagttgga
gagcagatggaagttgaggacttgaatggtaattctaatggtgctgaaaaggggaaagga
aattgctctgacgacgctggaacagctaacggaggggaggaggaggaggaggaggaggag
gatttagaggaagaacctctcgagaaggttctggaacccttctccaaggagcagctgaag
gtgattgtgcaagaggctgtaaacaaacatccagatttcattaaaaatgttacggcatgg
gccgataaagacccctcgcatcggaaaatttttgtgcacggtctgggatgggacgccacg
gccgaaaccctaaccaatgtgttcgccaactatggggagatcgaggactgcaaggccgtt
actgataaagtctccgggaaatccaaaggatatgcatttatactcttcaagcaccggagt
ggagctaagaaagctttgaaacagcctcagaagaagattgggaatcggatggcctcgtgt
caactggcttcttctgggcctggtcctggacctgctccacctcctaatacacctccagtc
tctgactatactcagaggaagattttcgttagcaatgtttctgcagattttgatccccag
aaattattggcattcttttctaagtatggggagattgaggagggaccattggggttggat
aagatatcagggaaaccaaaaggtttctgcttgtttgtgtacaagacagttgagagtgca
aagaaggcattggaggagcccaataagatttttgaggggcaagaattgaattgctccaag
gcaattgatggtccaaagcaaaataagaatttccatcaacatcaacatcatcataagcag
caacaatactatcagcatacagcaaagaagggaaaatattcagctggtggagttggaagt
gcagctacttcaaccgggcatttaattcgcccacaacctggtcctgcacctgtgggattc
aatcctgcagttgccccggttcttgggcaggcactgacagcattgttggcaacccaagga
ggtggattagggataggcaactttcttggagggcttgggcctgtgaatcctcagggagtg
ccacctgggatgaacaactcgacaggatatggggtccagggtgctgcagctggctatgga
gttcagccaggaatgcagggaggatatcaatacccgcagatgggacatggaggtgtgagg
ccacacggaggtgctccctatatggggcgtggtcgttag

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