Ipomoea triloba (trilobed morning glory): 116004545
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Entry
116004545 CDS
T07384
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116004545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116004545
03009 Ribosome biogenesis [BR:
itr03009
]
116004545
04131 Membrane trafficking [BR:
itr04131
]
116004545
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
itr04147
]
116004545
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
116004545
Ribosome biogenesis [BR:
itr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
116004545
Membrane trafficking [BR:
itr04131
]
SNARE
SNARE associated proteins
Others
116004545
Autophagy
Aggrephagy
Other aggrephagy associated proteins
116004545
Exosome [BR:
itr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116004545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
CDC48_2
AAA_2
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
AAA_17
RNA_helicase
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
Viral_helicase1
ABC_tran
AAA_7
NB-ARC
AAA_24
TsaE
NACHT
DUF815
AAA_lid_PRS2_C
Sigma54_activat
Zeta_toxin
Vps4_C
Sigma54_activ_2
Zot
Motif
Other DBs
NCBI-GeneID:
116004545
NCBI-ProteinID:
XP_031100501
LinkDB
All DBs
Position
14:complement(18257467..18263060)
Genome browser
AA seq
806 aa
AA seq
DB search
MSHQAESSDSKSTKKDFSTAILERKKAPNRLVVDEAINDDNSVVALHPATMEKLQLFRGD
TILIKGKKRKDTVVIALADETCEEAKIRMNKVVRSNLRVRLADVVSVHQCPDVKYGKRVH
ILPIDDTIEGVTGDLFESYLKPYFLEAYRPLRKGDHFLVRGGMRSVEFKIIETDPGEYCV
VAPDTEIFCEGEPVRREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEVLNSMAVSNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPVSKDVDLRALAKYTHGFSGADITEICQRACKYAIRENIEKDIEREKQRREN
PDSMEEDAEDEFAEIKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAE
SGSGGASGADPFATSTAAADEDDLYS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaccaagccgagtcatctgactcgaaaagtactaagaaggacttctctacggcg
attctggagcggaagaaggcgccgaatcggctcgtcgtggatgaggcgatcaatgacgat
aactccgtcgttgctctccaccctgctaccatggagaagctccagctcttccgtggagac
acgattctgattaaggggaaaaaaaggaaagatacggtggttattgctcttgctgatgag
acatgtgaagaggcaaagattaggatgaataaagttgtccggtcaaatttgagggtccga
cttgctgatgttgtatctgtacatcaatgtccagatgttaagtatgggaaacgtgtgcac
atacttcctatagatgatacaattgaaggggtcaccggtgatctctttgaatcatacttg
aaaccttactttttggaggcatatcgtcctttgaggaaaggagaccacttccttgttcga
gggggtatgagaagtgtggaattcaagatcattgagactgatccaggggaatattgtgtt
gttgctccagacactgaaatcttctgtgagggggagccagtgaggagggaggatgaggat
agacttgatgaagttgggtatgatgatgttggcggtgtgaggaaacaaatggctcagatt
cgtgaattagtagagctgccattgaggcaccctcaacttttcaaatccattggagtgaaa
ccgccaaagggtattttgctttatggccctcctggttctgggaagacactgatagcaaga
gctgttgccaatgaaactggtgcatttttcttttgtatcaatgggccagaaattatgtcc
aagttagctggagagagtgaaagcaaccttaggaaggcatttgaagaggctgaaaagaat
gctccatctattatatttattgatgaaattgattcaattgctcccaagagggagaagaca
catggtgaagttgaaagaagaattgtttcacaactcctaactttgatggatggattgaag
tcccgtgctcatgttatagttattggagctacaaatcgtcccaacagcattgatcctgct
ctcaggaggtttggtaggtttgacagggaaatcgacattggtgttccagatgaagttggg
cgccttgaagttcttcgcattcacactaagaatatgaaacttgctgaggatgttgacctg
gagagaattgctaaagacacgcatggttatgttggtgctgaccttgctgctctctgcact
gaagctgcacttcaatgtatcagagaaaaaatggatgtcatagatctggaggatgagaca
attgatgctgaagttttgaattctatggctgtttcaaatgagcacttccaaactgctctg
ggaacaagcaatccttctgcattgcgtgagactgttgttgaagtgccaaatgtcagctgg
gaagatattggaggacttgaaaatgttaaacgtgagcttcaagagactgtgcaatatcct
gtcgaacacccagagaagtttgaaaaatttggtatgtcaccctcaaaaggtgttcttttc
tatggcccccctgggtgtggtaaaactttactggccaaggcaattgcaaatgagtgtcaa
gccaacttcattagtgttaaagggcctgaattgctcaccatgtggtttggagaaagtgag
gccaatgtacgtgaaatttttgacaaggctagaggatcagcaccgtgtgttctcttcttt
gatgagcttgactctattgcaactcagaggggtagtagtgttggagatgctggtggtgcc
gctgatcgggttcttaaccaacttctcactgaaatggatggcatgacggcaaagaagact
gttttcattattggagctacgaacagaccagatattattgaccctgcactccttcgtccc
ggtcgtcttgaccaattaatatacatccctcttccagatgaagattctcggcatcagatc
ttcaaagcttgtctgagaaaatctccagtttccaaagatgtcgatttaagagctcttgcg
aaatacactcatggatttagtggagccgatatcacagagatctgccagagggcatgcaaa
tatgccatacgggagaacatagagaaagatatcgaaagggagaagcagaggagggagaat
cccgactccatggaagaggatgctgaggacgaatttgcagagataaaacctgcacatttt
gaggaatccatgaaatatgctcgtcggagtgtgagtgatgctgatatacgcaaataccaa
gcatttgctcaaacactgcaacaatctcgcggttttggaactgaattccgctttgctgag
tcgggaagtggcggggcctctggagccgacccatttgcaacctctactgcagcagctgat
gaagacgacttgtatagctaa
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integrated database retrieval system
