KEGG   Ipomoea triloba (trilobed morning glory): 116004573
Entry
116004573         CDS       T07384                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116004573
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:itr03041]
    116004573
Spliceosome [BR:itr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    116004573
 Complex B
    116004573
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Tachystatin_B zf-CCCH_4 Autophagy_act_C Torus
Other DBs
NCBI-GeneID: 116004573
NCBI-ProteinID: XP_031100539
LinkDB
Position
14:complement(11917769..11920835)
AA seq 319 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP
GVDAQGHPIDPHKMQEHFEEFYEDLFEELSKYGEIESLNVCDNLADHMVGNVYVQFREEE
QAANALKNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENSCNRGGYCNFMHLKRISREL
RRHLFGRYHRRHSRSRSRSPYRHKSYEERSHRSHSRKYDDRDQYYESRSRRHQSTSPGHR
KGRSRSPGGRRERSPVRDGSEERRARIEQWNREKEQADLAKNANAEVLDHKSENNEKGYA
QNEDQYYGQHPSQRNGYAY
NT seq 960 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcatcgatattcggaacggagaaggatcgggtgaactgccccttc
tacttcaagatcggcgcgtgccgtcacggcgaccgctgctccaggctccataccaagccc
agcatcagccccaccatcctcctctccaacatgtaccagcgccccgacatgatcaccccc
ggcgtcgacgcccaaggccacccaatcgatcctcataagatgcaagagcacttcgaggaa
ttttatgaagatttgtttgaggaattgagcaagtatggtgagattgagagtctgaatgtt
tgtgataatctggctgaccacatggtgggcaatgtttatgttcagtttcgagaagaggag
caggctgcaaatgctctgaaaaatctctcaggaaggttctatgctggaagacctatcatt
gttgatttctctccagtaactgattttcgtgaagcaacatgtagacagtatgaggaaaat
tcctgcaatcgtggggggtactgcaactttatgcatcttaagaggattagcagggagctg
aggcggcatttgtttgggaggtaccacagaagacacagccgaagcagaagcaggagtccc
tacaggcataaaagctatgaagagcgttctcacaggagccatagtaggaagtatgatgat
agggatcagtactacgagagtaggagtaggagacaccaaagcacaagtcctggccatcgg
aaggggcgaagcaggagcccaggtggtagaagagagagaagtcctgttagggatggaagt
gaagagaggcgtgctaggattgagcagtggaatcgggaaaaggagcaggctgaccttgct
aaaaatgccaatgcagaagtccttgatcacaaaagtgaaaacaatgagaagggttatgca
caaaatgaggatcagtactatggccaacatccttcacaacgaaatggatatgcatactga

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