Ipomoea triloba (trilobed morning glory): 116004647
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Entry
116004647 CDS
T07384
Name
(RefSeq) protein CHROMATIN REMODELING 5 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
itr03021
]
116004647
03036 Chromosome and associated proteins [BR:
itr03036
]
116004647
Transcription machinery [BR:
itr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
116004647
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
116004647
SLIK complex
116004647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
116004647
NCBI-ProteinID:
XP_031100634
LinkDB
All DBs
Position
14:15687451..15705899
Genome browser
AA seq
1690 aa
AA seq
DB search
MAFYRNYSNETVDFEEKRQGQGHRDPGIAGNEEVEATSSDNDDASRLQDGASEDARRIRD
EQQSTRIMGVAGKWGSSCWKDSQPMHNNGRSESREESKSGSDYKNEEESEDVSSDGSRED
RLESEDDGQQKEAGKGGSVPADEMLSDEYYEQDGDDQSDSLHHRAANHTTSGYTTKLPAR
PVVASSYTSRKPKTSKACQYDDDADYGDEEEDEDDPDDADFDPDFGTTSDRRGTKEKDED
WEGEDSDEENNSEDDDDLDILDEADDYYKKTRGKQQTRGGRNVKSTRELKNAAPSARRKR
GRTSFEDEESSEQDSEGDSDEDFRSMSRRGGNLRRKNSGRSMTASVSGRVSEQRTSGRRS
VRKVSYAESEESEELDECKKKKNQKEELEEEDADSIEKVLWHQPKGIAEEAMRSNKSTHP
MLLSHLFDSEPDWNEMEFLIKWKGQSHLHCQWKPYSELQNLSGFKKVLNYIKKVTEDVRY
RKTVSREEIEVNDVSKEMDLDIIKQNSQVERVIADRIGKDSLDNVVPEYLIKWQGLSYAE
ATWEKDTDIAFAQDAIDEYKAREAAMMIQGKTVDFQRKKSKGSLRRLDEQPEWLKGGKLR
DYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQHIHGPFLVVVPLSTL
SNWAKEFKKWLPNMNVIVYVGTRASREVCQQYEFYNDKKAGSSMRFDTLLTTYEVLLKDK
AVLSKIRWSYLMVDEAHRLKNSEASLYTTLLEFSTKNKLLITGTPLQNSVEELWALLHFL
DHDKFKSKDDFIQNYKNLSSFNENELANLHKELRPHILRRVIKDVEKSLPPKIERILRVE
MSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDAN
FFGSTKLERVILSSGKLVILDKLLDRLHETKHRVLIFSQMVRMLDILAEYLSLKGFQFQR
LDGSTKAELRQQAMEHFNALGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQ
AMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKESKK
GAVFDKNELSAILRFGAEELFKEDKNDEESKKRLLSMDIDEILERAEKVEEKGADEEQGS
ELLSAFKVANFCGAEDDATFWSRWIKPEAIAEAEEALAPRAARNIKSYAETNPLVETNKR
KKRGTEAQERFPKRRKADTGYSAPAIEGAAAQVRGWSYGNLSKRDATRFSRVVKKFGNDS
QISLIAAEVGGAVEAAPTEAQIELFDSLIDGSREAVKGEIVDPKGPLLDFFGIPVKADEL
LSRVEELQLLAKRISRYDDPISQFRALAYLKPATWSKGCGWNQKDDARLLLGIHYHGFGN
WEKIRLDEKLGLTKKIAPAELQHHETFLPRAPQLKERASQLLEMEVAAIGGKNPNVKVGR
KGNKKQKDSLPNITASHSKAKHGKPSNKGLAQKPQRTEQLVKEEGEMSDNEEVYKQFKEG
KWMEWCEDVMIDEEKTLKRLQKLQTTSADLPKEKVLSKIRNYLQLLGRRIDQIVFEYAQE
SYKQERMTTRLWNYVSTFSNLSGERLQQIYSKLKQEQQVSGVGPSQMNGSASGFINKGFD
TEKFEAWKRRKRAESDAHSQFQQRPITNGVRVPEPNSSSGILGAAPNNGRPFRMHQSGFS
QRQGFSSGIK
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atggccttttacaggaattattcaaatgaaacagttgattttgaggagaaaaggcaggga
caagggcacagagatcctggaattgctggaaatgaggaggtggaggctacttcaagcgac
aatgatgatgccagtaggttgcaggatggtgcttcagaagatgctcggaggataagggac
gaacagcaatctacaagaataatgggtgtggctggaaaatggggctcaagctgttggaag
gactctcaacctatgcacaacaatggcaggtctgagtcaagagaggagtcaaagagtggt
tcagattataaaaatgaggaagaatctgaagatgtgtcatctgatggtagtagggaggat
agattagagtctgaagatgatggtcaacagaaagaagcaggcaagggtgggagtgttcca
gctgatgagatgctgtctgatgagtattatgaacaggatggtgatgatcagagtgactcc
ttacatcaccgtgctgccaaccatactactagtggctatactaccaaattgccggccagg
ccagttgttgccagcagttatacatcaagaaagccaaaaacttccaaagcttgccagtat
gatgacgatgctgattacggtgatgaagaagaagatgaagatgatccagatgatgcggat
tttgatcctgattttggtactacaagtgatcgcaggggaactaaggagaaggatgaagac
tgggagggtgaagattctgatgaagagaataatagtgaagatgatgatgatctggatatc
ttagatgaagctgatgattattataaaaaaacaaggggcaagcaacaaactaggggtggt
cgtaatgtgaaatctaccagagaacttaagaatgctgcaccttctgctcgacgtaaaaga
ggcagaacatcttttgaagatgaagaatcttctgaacaggattctgaaggtgatagtgat
gaagattttcggagtatgtctagaagaggtggaaatttgcgcaggaagaatagtggtcga
tctatgactgctagtgtttctggtagggtcagtgaacagcgaacatcaggtcgtcgatca
gttcgaaaagtatcatatgctgagagtgaagaaagtgaagagcttgatgaatgcaagaaa
aagaagaaccaaaaggaggagcttgaagaggaagatgccgattcaattgaaaaggtatta
tggcatcaaccaaagggcattgcagaagaagctatgaggagtaataaatcaacacatcct
atgttgttaagtcacttatttgactctgaacccgactggaatgaaatggaatttctgata
aagtggaaaggccagtcgcatttgcattgtcagtggaagccatattctgagctacagaat
cttagtgggtttaaaaaggttctgaattacattaaaaaagtgacagaggatgtgcggtat
cgaaagacagtatctcgcgaggagattgaggttaatgatgtgagcaaggaaatggatttg
gacataattaaacaaaatagtcaggttgagagggtcattgcagaccgaattggaaaagac
agcttagataatgtggtgccagagtatttaatcaaatggcaagggctttcttatgcagaa
gcaacatgggagaaggacactgatattgcttttgctcaagatgccattgatgaatacaag
gctcgtgaggctgcaatgatgattcaagggaaaacagtagatttccagcggaaaaagagc
aaaggtagtttaagaagacttgatgaacaacctgagtggttgaaggggggaaagcttcga
gattatcagcttgaaggtttgaattttcttgttaacagttggagaaatgatacaaatgtt
atattagctgatgaaatgggtcttggtaaaactgttcagtcagtttcaatgctaggtttt
cttcagaatgcacaacacattcatggtccatttcttgttgttgtaccattatcgactttg
tccaattgggcaaaagaattcaagaaatggctacctaatatgaatgttattgtatatgtt
gggactcgtgcaagccgtgaggtctgccaacaatatgagttctacaatgacaagaaggct
ggtagtagcatgagatttgatactcttttaactacctatgaggtgttgttaaaggacaag
gcagttctgtccaaaataaggtggagctaccttatggttgatgaagcccataggctaaaa
aacagtgaggcttctctgtatacgacactattggaatttagcaccaaaaacaagttgctc
atcactggtactcctttgcaaaatagtgttgaagagctatgggctttgcttcactttctt
gatcatgataagtttaagagcaaggatgacttcattcagaactacaagaatcttagttcg
ttcaatgaaaatgagcttgctaatcttcacaaggaattgaggcctcatattctccgaagg
gtcatcaaggatgttgagaagtctttgcctcctaagattgagcgaattcttagggttgag
atgtcaccactgcagaaacagtactataagtggatcttggagcgcaacttccacgacttg
aataaaggagtgcgaggcaatcaggtgtcgcttctgaacattgttgtagaattgaagaag
tgctgcaatcatccatttctgtttgaaagtgctgaccatggttatggtggggatgccaac
ttttttggtagcactaaactggaaagagtaatcctgagcagtgggaaactagttatactt
gacaaactgcttgacagattacatgaaacaaagcaccgtgtattgatattttctcagatg
gttaggatgttggatatattggcagagtatctgtcactcaagggtttccaatttcagaga
cttgatggtagtacaaaagctgagttgcgtcagcaagcaatggaacattttaatgctctg
ggtagtgaagatttttgttttcttctttcgactcgtgcgggtggcttgggtataaatctt
gcgacagcggacacagttattatattcgattctgactggaatcctcaaaatgatttacag
gctatgagtagagctcataggataggacaacaagaagttgtcaacatttaccgatttgtt
acaagcaaaagtgtagaggaagatatcttggagcgtgccaagaagaagatggttcttgac
catctagtgatacaaaaactgaatgctgaaggcagattagagaaaaaggaatccaagaaa
ggagccgtctttgataaaaatgagctctctgcaatcttacggtttggagctgaagaacta
tttaaggaggataaaaatgatgaagagagcaagaagaggcttcttagtatggatatcgat
gagattcttgaacgagcagagaaagttgaagagaagggtgctgatgaagagcaaggaagc
gagttgctcagtgcttttaaggttgctaatttctgtggtgctgaagatgatgctacattt
tggagtcggtggataaaacctgaagccattgcagaagctgaagaagccttggctcctcga
gctgctcgaaatattaagagttatgcagaaactaaccctctggttgaaactaataaaaga
aagaaaaggggcactgaggcccaggaaagattcccaaaacgtcgcaaggcagatactggt
tactcagctccagcaattgagggtgctgctgctcaagtaagaggatggtcttatgggaac
ttgtcaaagagagatgccacacgtttttctcgtgtggtcaagaagtttggtaatgacagc
caaattagcttaattgctgcagaagttggtggggctgttgaagcggctccaactgaagcc
cagattgaactttttgattctttgattgatggcagtagagaagcagtaaagggagaaatt
gtggatccaaaggggcctctgttagatttttttggtatccctgtaaaagccgatgaacta
ctaagccgtgtcgaagagcttcagcttctagcaaagcgcattagtaggtatgatgacccc
atctcacaatttcgagcacttgcttatctgaaacctgctacctggtctaaaggttgtggc
tggaaccagaaggatgatgcaagattgcttttgggaattcattatcatggatttggaaac
tgggagaagatacggttggatgagaagcttggtcttactaagaagattgctcctgctgaa
cttcaacatcatgagactttcttacctcgagctccccagctgaaggaacgagcttctcaa
ctcttagagatggaagttgctgctattggtggcaagaatcctaatgtcaaagtgggccgc
aagggtaacaagaagcagaaggacagtcttccgaacatcacagcatctcactcaaaagct
aaacatgggaaaccgagtaacaaaggtttggctcaaaagccccagaggactgagcagttg
gttaaagaggagggtgaaatgtcagacaatgaagaggtgtacaaacaatttaaggaagga
aaatggatggaatggtgtgaagatgtgatgattgatgaggagaagacactaaagcgtctt
cagaaactgcagaccaccagtgcagatcttccaaaggagaaggtgctatccaaaattcgg
aattaccttcagcttcttggccggaggattgatcaaatagtttttgaatatgcacaggag
tcatataaacaagaaaggatgacgacgcgattatggaattatgtgtcaacattttcaaat
ttatctggcgagagacttcagcagatttattctaaactcaaacaggagcaacaagtatca
ggagttggaccttctcaaatgaatggttctgcatctgggttcataaataagggttttgac
acagagaaatttgaggcatggaaaagaaggaaaagggcagaaagtgatgctcattcacaa
tttcagcaaagacctatcactaacggtgttagagtacctgaaccaaactcatcttctggg
attttgggtgctgctcctaacaatggaaggcctttcaggatgcatcaatctggcttttca
caaagacaaggtttttcatctggtatcaaataa
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integrated database retrieval system
