Ipomoea triloba (trilobed morning glory): 116004859
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Entry
116004859 CDS
T07384
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
116004859
04121 Ubiquitin system [BR:
itr04121
]
116004859
Enzymes [BR:
itr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116004859
Membrane trafficking [BR:
itr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
116004859
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116004859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
CxC4
zf-RING_16
zf-ANAPC11
Zn_ribbon_6
zf-Nse
Motif
Other DBs
NCBI-GeneID:
116004859
NCBI-ProteinID:
XP_031100904
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All DBs
Position
14:complement(16880957..16883751)
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AA seq
324 aa
AA seq
DB search
MSSGRYTHWCYQCRQPVKPRGSNILCPYCHGGFVLELNEVVGDGEQRGHIGSNIEDDHHS
RFMEPFPDPRFGIVDALEAFMRQRMAGRNPSYDIRSRSGMMPENNMSFGSGPWVIFHGQS
PVRMTPDDAFEYFFNGSSRMGGQRRTNFDDFFMGPGLQQLIEQLSMNGRQGPPPAPRSAI
DAMPTIRITERHLNTDSHCPVCQDRFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCR
LELPSNVSGRGRSNWSSRSSNASNGNNGNGSSNSNSNSSTDSNGQNQGRRNPFSFLWPFR
SSNQNSSSSAAAYEDNNGTNYYHY
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtgggagatatacacactggtgctaccaatgcaggcagccagttaagcctcga
ggatctaatattctttgcccatactgccatggtggctttgtgctagagctgaatgaggtg
gtaggggatggagaacaacggggtcatattggatcaaacattgaggatgatcatcactct
agatttatggaacctttccctgacccaagatttgggatagtggatgcccttgaagcattt
atgaggcagagaatggctggaagaaaccccagttatgatattaggtcgagatctggcatg
atgccagagaacaatatgtcttttggttctgggccatgggtgatatttcacggccaatct
cctgttcgtatgacacctgatgatgcttttgagtactttttcaatggcagttctagaatg
ggggggcagcgccgaactaattttgatgatttctttatgggacctggactgcaacaattg
attgagcagcttagtatgaatggcaggcagggcccaccaccagcgcctcgctctgcaatt
gatgccatgcccaccatcaggattaccgagaggcatctcaatactgattcacactgccct
gtttgtcaagataggtttgaattgggctctgaagcaaggcagatgccatgcaaccacatt
taccattctgattgtatcgtgccatggttggtccagcacaactcttgccctgtttgccgc
ctcgagcttccatcaaatgtttctgggagagggcgttccaattggagttcaagatccagt
aatgccagcaatggcaacaacggtaacggtagcagcaacagcaacagcaacagcagcacc
gacagcaatggccagaaccagggaagaagaaatcctttctcattcctatggcctttccgc
tcatctaaccagaactctagtagctctgcagcagcatacgaggacaacaatgggacaaac
tattatcactactga
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