Ipomoea triloba (trilobed morning glory): 116004860
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Entry
116004860 CDS
T07384
Name
(RefSeq) LOW QUALITY PROTEIN: protein argonaute 4-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116004860
03036 Chromosome and associated proteins [BR:
itr03036
]
116004860
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
116004860
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
116004860
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
116004860
microRNA pathway
RISC loading complex
116004860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
116004860
NCBI-ProteinID:
XP_031100907
LinkDB
All DBs
Position
14:16738319..16752779
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AA seq
907 aa
AA seq
DB search
MAEQDNNGAAEALPPPPPVPSDVIPVKAEADSTKKKAPRLPMARRGFGSKGQKIPILTNH
FKVNVSKNDGHFFHYSVALYYEDGRPVDSKGIGRKVLDRVHETYDTELAEKEFAYDGEKS
LFTVGALPRNKLEFTVVLEDVTSNRNNGNCSPGSPNEGDKKRLRRPYRSKTYKVEISFAA
KIPMNAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFASVGGG
VLGCRGFHSSFRTTQGGLSLNIDTSTTMIIQPGPVVDFLIANQNAKDPFSLDWAKAKRML
KNLRVTTSPTNQEYKISGLSEKSCREQTFTLKQKSKDDDGEVQNTEVTVYDYFVNQRNID
LRYSADLPCINVGKPKRPTYFPIELCSLVSLQRYTKALSTFQRASLVEKSRQKPQERMQV
LSNALKINNYDAEPLLNSCGISINNNFTQIEGRVLPAPKLKVGNGEDFFPRNGRWNFNNK
KLVEPAKIERWAVVNFSARCDIRGLVRDLMKCGEMKGISVEPPFDVFEENPQFRRAPPVV
RVEKMFEDIQSKLPGAPKFLLCLLPERKNCDVYGPWKRKNLADHGIVTQCMSPTRVNDQY
LTNCLLKINAKLGGLNSMLTVEHSPXSPLFSKAPTIIIGMDVSHGSPGQTDVPSIAAVVS
SRQWPLISRYRASVRTQSAKVEMIDNLFNRVSDTQDDGIMREQLLDFYVSSGKRKPDQII
IFRDGVSESQFNQVLNIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQPGSPDNVQ
PGTIIDSKVCHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEVRFSADELQELVHSLSYVYQ
KSTTAISVVAPICYAHLAATQLGQWMKFEDTSEKSSSHGGGGSKAGPAPVSQLPRLEEKV
SSSMFFC
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcaagacaacaatggagcagctgaggctcttcctcctccaccaccggttcct
tcagatgttattccagtaaaagctgaagcagattctaccaagaaaaaggcccctcgcctt
cctatggctagacgagggtttgggtccaagggacaaaagattcctatccttaccaatcac
tttaaagtgaatgtgtctaaaaatgatggacacttttttcactacagtgttgccctttat
tatgaagatggtcgtccagtggatagcaaaggcattggcagaaaagtcttggatagagtg
cacgaaacatatgatacagaactagctgaaaaagaatttgcatatgatggtgaaaagagt
ttgttcacagttggtgcacttcctcgaaacaaacttgagttcacagttgttcttgaggat
gtcacttcaaataggaacaatggtaactgcagtcctgggagtcctaatgagggtgacaag
aaaaggttacggcgcccttaccgatcaaagacttataaggtggagattagctttgctgcc
aaaattcctatgaatgcaattgcaaatgccttgcggggacaagagtctgagaactctcaa
gaagcgctgagggttttggatatcatattgaggcagcatgctgcgaagcagggttgcctg
cttgttcgacaatccttcttccataatgacccaaaaaattttgctagtgttggaggtggt
gtccttgggtgtcgagggttccattcaagcttcaggaccactcagggtggcctgtctttg
aacattgatacatctaccacaatgataattcaacctgggcctgtggtagatttcttaatc
gccaatcagaatgcgaaggatccattttctctagattgggcaaaggctaaaaggatgctg
aagaatctgagagtgactacaagtccaacaaatcaagagtacaagataagtggattaagt
gagaagagctgtagagagcaaacctttactttaaagcagaaaagcaaggatgatgatggt
gaagttcagaacactgaagtgactgtttatgattactttgttaatcaacgtaacatagac
ttgcgctattctgctgatttaccatgtatcaatgttggaaagccaaaacgtccaacttac
ttccctatcgagttgtgctcattggtgtccttgcaaagatacacaaaagcactctccact
tttcaaagagcttctctggtggagaaatcaagacagaagcctcaagagaggatgcaagtt
ttaagtaatgcactgaaaatcaacaactatgatgctgagccactgcttaattcatgtggc
atatcaatcaataataacttcactcagattgagggtcgtgttctgcctgccccaaaattg
aaagttggaaatggagaggatttctttcctcgaaatgggagatggaacttcaataacaag
aaactagtggagccagcaaagattgaacgttgggctgttgtaaatttctctgcacgctgt
gatatacgtggccttgtcagagatttgatgaaatgtggagaaatgaaagggattagcgtg
gagcccccttttgatgtatttgaggagaacccacagttcagacgagctccacctgttgtg
agagtagagaaaatgtttgaagacatccaatccaagcttcctggggcacctaagttcctt
ctctgtttgttgcctgaaagaaagaactgtgatgtatatgggccatggaaacgaaagaat
ctggctgatcatggaattgtgactcaatgcatgtcaccaaccagagtgaatgatcaatat
cttacaaattgcctccttaagatcaatgccaagcttggagggctgaattcaatgttgact
gttgaacattctcctntctccccccttttttcaaaggctcccaccattattattgggatg
gatgtgtctcatggctctcctggtcagactgacgttccatcaattgctgcggttgtgagt
tcgaggcagtggcctcttatttctcgttatagagcatcagtgcgtactcagtctgcaaag
gttgaaatgattgataacttgtttaatcgtgtttctgacacacaagatgatggaattatg
agggagcaattgctagatttttatgttagttctgggaaaaggaagcctgaccaaattata
atcttcagggatggtgtcagtgaatcccaattcaatcaagttcttaacattgaacttgat
cagatcattgaggcttgtaaatttcttgatgagaaatggtcacccaagttcacagtcatt
gttgctcagaagaatcatcacaccaagttcttccaacctgggtctcctgataatgttcaa
cccgggacaattattgatagtaaagtttgtcatccgaaaaacaatgacttttacttgtgt
gctcatgcgggaatgattgggaccacaagaccaacacactaccatgttctttatgatgag
gttagattttcagctgatgaactgcaagaacttgtgcacagcctatcttatgtgtaccaa
aagagcaccaccgctatatctgttgttgctcctatttgctatgctcatttggctgccacc
cagttaggacagtggatgaaatttgaggatacatctgagaagtcttcaagccatggtggt
gggggatcaaaagcaggtccagccccagtttctcagttgccccgactagaagaaaaggtc
tcaagttcaatgtttttctgctga
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