Ipomoea triloba (trilobed morning glory): 116005149
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Entry
116005149 CDS
T07384
Name
(RefSeq) probable pectate lyase 20
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116005149
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116005149
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
116005149
NCBI-ProteinID:
XP_031101262
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Position
14:21932036..21937201
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AA seq
437 aa
AA seq
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MAAPSLIAVFCLLIALMSPFIDASQSADEARFQSLKNSSMANRLNDHHSESKHEHAVDDP
EAVASMVDTIIRNATERRKLGFFSCGTGNPIDDCWRCDRNWQRHRKRLANCAIGFGRNAV
GGRDGRYYVVSDPGDDDPVNPRPGTLRHAVIQDQPLWIVFKRDMVITLKQELIMNSFKTI
DARGANVHIANGACITVQFVTNIIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMADGDGIS
IFGSSHIWIDHNSLSNCADGLIDAVIGSTAITISNNYFTHHNEVMLLGHSDSYTRDKAMQ
VTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRYLAPTNR
FAKEVTKRVETADGVWKHWNWRTEGDLMLNGAYFIASGRVSSASYARASSLAAKSSSLVG
TLTSNAGVLSCRTGMQC
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcggctccgagtttaatcgccgttttctgtttgttgattgctctgatgtcgccgttc
attgatgcgagccagagtgcggatgaagctaggtttcagagcttgaagaactcgtcaatg
gcgaacaggttgaatgatcatcattctgaatccaaacacgagcacgctgttgacgatcca
gaggcggttgcatcaatggttgacacgattattcgtaatgctacggagaggaggaaattg
ggattcttttcatgcgggacaggaaaccccattgacgattgctggcgttgcgatcgcaac
tggcagcgccaccgtaagcggctagccaactgcgcaattggatttgggcgcaacgccgtg
ggcggccgcgacgggaggtactacgtggtgtccgacccgggcgatgacgacccggtgaat
cccaggcccggtacgctccgccacgccgtgattcaggaccagccgttatggatcgtgttc
aagcgcgacatggtgatcacgctgaagcaggagctgatcatgaacagcttcaagaccatc
gacgcacgcggcgccaacgtccacatagctaacggcgcctgcattaccgtccaattcgtc
acgaatatcatcatccatggcctccacattcacgactgcaaacctaccggcaacgccatg
gttcgcagctcgccgtctcattatggctggaggaccatggccgacggcgatgggatctcg
attttcggatcgagccatatttggattgaccataactcgctttctaactgcgctgatggc
ctgattgatgcagttataggatcaactgcaatcaccatttcaaacaattacttcacccac
cacaatgaggtgatgctgctggggcacagtgattcttacaccagagacaaggcaatgcag
gtgacaattgcctataatcactttggggagggtttgattcaaagaatgccaaggtgtagg
catgggtactttcatgtggtaaacaatgactatactcattgggagatgtatgccattggt
ggcagtgctgctcccacaatcaacagtcaaggaaacagatacctagccccaaccaaccgt
tttgccaaagaggtgactaaaagagtggaaactgctgatggtgtatggaagcactggaac
tggagaacagaaggagaccttatgcttaatggagcctacttcattgcatctgggcgtgtg
tcgtcggctagctatgcaagggcttctagtttggcagcgaaatcgtcttccctggtgggt
actcttacttctaatgctggtgttctttcctgtcgtacgggaatgcaatgttaa
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