Ipomoea triloba (trilobed morning glory): 116005155
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Entry
116005155 CDS
T07384
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
itr04131
]
116005155
04121 Ubiquitin system [BR:
itr04121
]
116005155
Enzymes [BR:
itr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116005155
Membrane trafficking [BR:
itr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
116005155
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116005155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
PRC2_EED_ins
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
116005155
NCBI-ProteinID:
XP_031101271
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All DBs
Position
14:complement(6326180..6328652)
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AA seq
467 aa
AA seq
DB search
MTDKKESPHCFPFLSPFHFNRFSTQSRIPNLKNQPKFIRNTEGESSPSSHPPHSTSQAEE
EDPVAKMDGAQASRYWCYHCSRVVNPIMEIEPLKCPICQSGFVEEMESAAAPETTNENAF
DFGGADSERALSLWAPILLGMMSNPRRRRSSSSRFRRMEFEEEDDEDNNNNNNNNNNNNE
RNHEEGDQTELDRELESIIRRRRRSSATILQLLQGIRAGMLSETENSEGGGGGDDRERER
ERDRDRENRDRERVILINPFNQTIIVQGSYDSNTNSGNHNMGSLGDYFIGPGLDMLLQHL
AENDPNRYGTPPAQKEAIEAMPMVKVEDLLQCSVCLEDFEVGCEAKEMPCKHKFHSGCIL
PWLELHSSCPVCRHQLPFDDSKLESNGSRDNAAMNMDGNRGDGGGDPNGDARNENGRQYS
VPLPWPFSSLFSPSTSAPGTQSNADGHSPSSPPTNATPGAHSHTHED
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgactgataaaaaggagagcccccactgctttccattcctttctcccttccatttcaac
cgcttctcaacacagtcaagaatcccaaacctcaaaaaccaaccaaaattcataagaaat
actgagggagaatcatctccctcctcccacccccctcattcaacctctcaagctgaggaa
gaagatccagtagccaagatggatggagcccaggcatctagatattggtgttaccactgt
tcaagggtggtgaacccaatcatggagattgagccattaaaatgccccatctgtcaaagt
ggctttgtggaggaaatggaatctgcagccgccccggaaactactaacgagaacgccttc
gattttgggggggctgattcggaacgagcactctccctttgggcgccaatcttactcggc
atgatgagcaacccacgtcgcaggcgtagtagtagcagcaggttcaggcgcatggagttt
gaagaagaggatgatgaggacaataataataataataataataataataataataatgag
cgtaaccatgaggagggtgatcagactgaactagaccgggaactggaatctatcattcgt
aggaggaggaggagctcagccacgattctccaactcctccaaggcattcgagctggaatg
ttatctgagacggaaaattctgaaggcggtggtggtggtgatgatagggagagggagagg
gagagggaccgagacagggaaaacagggacagagagcgcgtgattttgataaatcctttt
aatcaaaccatcatagttcagggttcttatgactcgaataccaattcagggaaccataac
atgggctccttgggtgattatttcataggacccggtttagacatgctactgcagcacttg
gctgagaacgatccgaacaggtatggcaccccgccagctcaaaaagaggcaatcgaggca
atgccaatggtaaaagttgaggatttgttgcagtgttctgtctgtttggaagactttgaa
gttgggtgtgaagcaaaagagatgccttgtaagcacaagttccacagcgggtgtatcctc
ccgtggctggaacttcacagctcctgtcccgtgtgtaggcaccagctgcctttcgatgat
tcaaagctcgagtccaacgggtccagggataatgcagcgatgaacatggatggcaataga
ggagatggaggaggagaccctaatggagatgcaagaaatgaaaatggacgacaatattca
gttccgcttccctggccattcagtagtttgttttcaccctcaacctcagccccggggacc
caatctaatgctgatggtcattcaccatcaagcccaccaacaaatgctaccccgggggct
catagtcatacacacgaggactaa
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