Ipomoea triloba (trilobed morning glory): 116005298
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Entry
116005298 CDS
T07384
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 7
KO
K05391
cyclic nucleotide gated channel, plant
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
116005298
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
itr04040
]
116005298
Ion channels [BR:
itr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
116005298
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
116005298
NCBI-ProteinID:
XP_031101427
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Position
2:23775974..23782821
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AA seq
721 aa
AA seq
DB search
MAGKANCGFNIDGMASAIPPTNPSSMSIKLGVIRGSEGLMTFGRSLKCGVTRVVFPEDLK
VSEKMIFDPQDKSLLFWNRLLVISCIFSVAVDPLFLYLPVFKSDEDHCLHIDSSLAYTTT
TLRTIIDSFYLIRIILQFRTAYIAPSSRVLGRGELVIDPKEIASRYIHRYFIVDLLSILP
LPQIVVLRFLNGSRGSDVVGTKRALVLLVILQSIPRFFRFLPLTSDLKKTSGVFAETAWL
GAAYYMLWFMLASHIFGAYWYLLAVERKNFCWQKACLDSADCSPSYSLLFCSLDRDKTAN
LTDWRQITEDVLHKNCVADDDSPFNYGIYAQAVSSGILDSEKFIPKYCYCLWWGLQNLST
LGQGLETSTYPLEVLFSIALAIIGLLLVSILIGNMQTYLQSITVRLEEMRIKRRDSEQWM
HHRVLPPELRERVRRYDQYKWLETRGVDEESLVQNLPVDLRRDIKRHLCLNLVRRVPLFA
NMDERLLDAICERLKPSLFTENTYIVREGDPVDEMLFVIRGRMESVTTDGGRSGFFNRGI
LKDSDFCGEELLTWALDPKAGANLPPSTRTVKALTEVEAFALIADELKFITTQFRRIHSR
QVQHTFRFYSQQWRTWASMYIQVAWRRYTRRKNVELRHSEAGYDDEDDDNDETTLNPGIS
SSSSSSFSNRSIVATMYASRFAANALSKVRKFRSSSLIMKPPKPPEPDFDKEDLTNDQRF
I
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaaggcgaattgtggctttaatatagacggaatggcttctgctataccacct
accaatccatcatcaatgtcaataaaactgggagtgataagaggatctgaagggctaatg
acattcggtcgatcactgaagtgtggagttaccagagttgtgttcccagaagatctcaag
gtctctgagaaaatgatatttgatcctcaggacaagtccctcctgttttggaataggctt
ttggttatttcatgtatcttttcagtagcagttgatcctctatttctttaccttccggtt
ttcaagagtgatgaagaccactgtcttcacatagattcaagtttagcatacacaacaacc
accttgaggacaataatcgattcgttttacctcatccgaataattctccagtttcgcaca
gcttacattgctccctcatctcgggttttgggacgaggtgaactcgtgatagatcccaaa
gaaattgcatccagatacatacatcgttattttatagtcgatcttctttctattctccct
ctgcctcagattgtggtcttgagattccttaatggatcccgaggctcggatgtagtaggt
acaaagagagctctagttctccttgttattcttcaaagcattcctagatttttccggttt
ttacctctaacttcggacttgaaaaagacttctggagtgtttgctgaaaccgcgtggctt
ggcgctgcatattacatgttgtggttcatgctggcaagtcatatatttggagcctactgg
tacctattagctgtggaacgtaaaaatttctgctggcaaaaagcgtgtttagatagtgca
gattgcagtccaagttattctttactgttttgttcacttgatagagataaaactgcaaat
ttaactgattggaggcagataactgaagatgttctccacaaaaactgtgttgctgatgac
gattctccgtttaactatggcatatatgcgcaagctgtgtcatctggtattcttgactct
gaaaaattcatccccaaatattgttattgcttgtggtggggcttgcagaatttgagcaca
cttgggcagggtcttgaaacaagtacatatcctttggaagttctgttttcaatagcattg
gccattattgggctcctgttggtttctattctcattggaaacatgcagacgtatcttcaa
tctataacggttaggctggaggagatgaggataaaaaggcgcgactcggagcaatggatg
catcacagggtgttgccaccggagctaagggaaagagtgaggcgctatgatcaatacaaa
tggttggaaacaagaggtgtagatgaagagagtctggtgcagaatctgcctgtagatctc
agaagagatattaagcgccatctttgtctgaatttggttagaagggtgcctctattcgca
aacatggatgagaggctgctggacgccatatgtgagcgactgaagccaagcttgttcaca
gaaaacacgtacatcgtccgagagggcgatccagtggacgagatgctcttcgtcatccgc
ggccgcatggagagcgtgacaacagacggtggtagaagcggcttcttcaaccgtggcatt
ctaaaggatagcgatttctgcggggaggagcttctcacatgggcgctagacccaaaagcg
ggggcgaacttgccgccatcaacccgcacggtgaaggccttgacggaagtagaagccttt
gcactgatagccgatgagttgaagttcatcaccacccaattccggcgcatccacagtcgg
caagtgcagcacactttccggttttactcgcagcagtggaggacgtgggcttccatgtac
atccaggttgcgtggcggcgctacacccgccgaaaaaatgtagagctccgccacagcgag
gccggctacgacgacgaggacgacgataatgatgaaaccacgttgaaccctgggatttcg
tcatcgtcctcctcctcctttagcaacagaagcatcgtcgccaccatgtatgcttctcgg
ttcgctgcaaacgcactgtcgaaggtgcgcaaatttagatcttctagcctcatcatgaaa
cctcctaagcctcctgagcccgactttgataaagaggatctcactaatgatcaacgcttc
atttga
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