KEGG   Ipomoea triloba (trilobed morning glory): 116005620
Entry
116005620         CDS       T07384                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116005620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:itr03019]
    116005620
   03041 Spliceosome [BR:itr03041]
    116005620
Messenger RNA biogenesis [BR:itr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     116005620
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     116005620
Spliceosome [BR:itr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    116005620
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Nup35_RRM_2
Other DBs
NCBI-GeneID: 116005620
NCBI-ProteinID: XP_031101722
LinkDB
Position
15:2007246..2010910
AA seq 341 aa
MEEVKKRKLDEGAWNGQVDSSISPPAAEELRSLLDPLPKPQLVDLLAKLGSQYPSIAEEI
KNVARADPALRKLFVRGLAWDTSSETLCAAFEEHGEIEEGAVIFDKATGKSRGYGFITFK
DMESAQRALKAPSKMIDGRMAVCNLASEGLSSSSITPDQAQRKLYVGGLSPETTTEMLLN
FFRRHGDIEEGSVAYDKDTDKSRGFGFVTYKTVESAKKAIDDPQRMLGGRNITVKLADNY
KGKVTQVQAPAAMVPVPLAMTPGYLQTQKPPGSEAPVGYTYPQSMAAYPNATYSSPLAVP
SPYPVQPQIPYPQYAAQYAAKRDPPPTLPSFGGYPYYMPKP
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggaggaagtgaagaagaggaagctagacgaaggtgcatggaatggtcaagtggattca
agcatatcacctccagcagccgaagaattacgctctctgcttgacccgctacccaaaccg
cagctcgttgatctcctcgctaagctggggtcacaatatccttcaattgctgaagaaatt
aaaaatgttgcaagagcagatcctgcccttcgaaagctttttgttcgtggtttagcttgg
gatacttcttcagaaactttgtgtgctgcttttgaagagcatggtgaaattgaggagggt
gcagtcatttttgacaaagcaactggaaaatctcgtggctatggctttattacctttaaa
gacatggaatcagctcagagagctctaaaagcacctagcaaaatgattgatggtcgcatg
gcagtttgtaacctggcatctgaaggcttaagcagctctagtattacacctgaccaagcc
cagaggaagctctacgttgggggtttatcaccagaaacgactactgagatgctgctcaac
tttttcagaaggcatggtgatatagaggagggttcagtcgcatatgacaaagatacagac
aaatctcgtggttttggttttgtcacctataaaacagtggagtccgcaaagaaagctata
gatgatccacaaaggatgctcgggggtaggaatattaccgtgaaacttgctgacaactac
aagggcaaggtaactcaagtgcaggcaccagcagcaatggttccagtaccgttagcaatg
acgcctgggtacctgcaaactcaaaaaccacctggctctgaagctcctgttggctacact
tatcctcagtctatggccgcctacccaaacgccacatattcaagtccactagctgtacct
tctccatatcccgtgcaacctcaaattccatatcctcaatatgctgctcaatatgctgcc
aagagagatcctcctccaacgcttccctcattcgggggttatccatactacatgccaaag
ccatag

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