Ipomoea triloba (trilobed morning glory): 116006145
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Entry
116006145 CDS
T07384
Name
(RefSeq) RNA polymerase II-associated protein 3
KO
K23002
RNA polymerase II-associated protein 3
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
itr03021
]
116006145
Transcription machinery [BR:
itr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
116006145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP3_C
TPR_1
TPR_2
TPR_BSK1_C
TPR_12
TPR_8
TPR_11
TPR_16
TPR_10
TPR_CcmH_CycH
DUF7109
TPR_9
HAGH_C
DUF3618
Motif
Other DBs
NCBI-GeneID:
116006145
NCBI-ProteinID:
XP_031102286
LinkDB
All DBs
Position
15:complement(12227688..12232515)
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AA seq
465 aa
AA seq
DB search
MARVPSKHSRDQLQGFEGLLNNLQDWELSLKNKDKKVKSEALGKEKLGEGVKSANELSSV
PQTNGRQVEKLNSSSSAAGQYGYLKNYDSINHLSSRFRTEDSFADANAEKELGNEFFKHK
KFNEAIDCYSRSIVLSPTAVAYANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRS
TARKELGKLRESTEDAEFALRLEPQNNEVKKQYAEVKALYEKEILKKVSGSTKKSVQRTQ
KSAKPEEEMKKSEATVQSVSSSSQRVTEIQGSKRTVSAKPSINIEASPMELDTKESDANP
NSSLATAERNRKSDRQELKESVQELAARAASYAKAEAAKNIAPPNSAYQFEVSWRGLSGD
RNLQVQLLKVTSPAALPQIFKNALSAPMLMDIARCIATFFMEDEDLAVRYLENLPKVPRF
SMIIMCLSSSDKAELAKIWDEVFSRGTSKNSNILYALRLKYGLKQ
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggctagggttccgagcaagcacagccgcgatcaacttcagggttttgaggggctattg
aataatctacaagattgggaactgtcattgaagaacaaggacaagaaggtgaaatcagag
gcccttggcaaagagaagctgggagagggagtaaaaagtgctaatgaactttctagtgtt
ccccaaactaatgggagacaagtggagaaacttaactccagctctagtgctgctggtcag
tatggatatttgaaaaattatgattcaatcaatcatttgtcaagtcgtttcaggacagaa
gacagttttgctgatgccaatgcagaaaaagagttgggaaatgagttctttaagcataaa
aaattcaacgaagcaattgattgctactctagaagcattgttttatcaccaactgcagta
gcttatgctaatagggctatggcttatcttaagatcaaaagattccaggaggctgaggat
gactgtacagaggctttgaacttggatgatcgctacattaaggcatactctcgccgttca
actgctagaaaagaacttggaaaattaagagaatccactgaagatgctgagtttgccttg
aggttggaaccacaaaataatgaggttaagaagcagtatgctgaagtaaaagctttgtat
gagaaggaaattcttaagaaagtatctggatcaaccaaaaaatctgttcaaaggacacaa
aaatctgcaaaaccagaagaggagatgaagaaatctgaggccactgttcaatctgtctcg
agcagttctcagcgggtgacagaaattcagggaagtaagagaactgtttctgcaaagcct
tccataaacattgaagctagtcctatggaacttgacacaaaagagtcagatgctaatcca
aattcttctttggctactgcagagagaaatcgaaaaagtgatagacaagagctgaaggag
tctgtgcaagagcttgctgcccgagcagctagttatgccaaagctgaagctgcaaaaaat
attgcaccaccaaattcagcttatcagtttgaggtttcttggcgtggactttctggtgac
cgtaatcttcaagttcaattactgaaggtaacttcacccgcggcattacctcagatattt
aagaatgcattgtctgctcctatgcttatggacattgctcggtgtattgccacatttttc
atggaagatgaagatttggctgttaggtacttggaaaatctgccaaaggtcccaagattc
agcatgatcatcatgtgtctatcatcttctgataaagctgaacttgccaagatatgggat
gaagtatttagcaggggaacttcaaagaactcaaacattctttatgcactacgcttgaag
tatggcctaaagcaatga
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