Ipomoea triloba (trilobed morning glory): 116006167
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Entry
116006167 CDS
T07384
Name
(RefSeq) E3 ubiquitin-protein ligase PUB23-like
KO
K27970
U-box gene family group I [EC:
2.3.2.27
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
116006167
Enzymes [BR:
itr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116006167
Ubiquitin system [BR:
itr04121
]
Ubiquitin ligases (E3)
U-box type E3
116006167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
zf-Nse
ARM_ARMC5
Rcd1
Hyccin
RICTOR_N
zf-RING_UBOX
Pho86
zf-C3HC4_4
Arm
Telomere_reg-2
Motif
Other DBs
NCBI-GeneID:
116006167
NCBI-ProteinID:
XP_031102314
LinkDB
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Position
15:complement(1230120..1231563)
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AA seq
405 aa
AA seq
DB search
MEEIQVPPYFLCPISLEIMKDPVTVSTGITYDRENIEKWIFSGKNNTCPVTKQGILDGDG
GELTPNIILRRYIQSWCTLHAAHGIERFPTPKPPVSRSQIAKLLKDAESPHMQAECLQRL
RVIASESEANRRCMESAGAAVFLASIIRNNNNGSDEALSLLHNLRLSEESLKSLAGHDNY
SNNLQFIESLIRAMQTQNYESRAFAVMLLKSILKVSEPLQLTTLKPSLYHATVQILKDSI
SQKASKAALHILIHVSPWARNRIKAVEAGATAVLIDLLLESTEKRTCEMILTSLDQLCQC
AEGRAELLSHPAGLAVVSKKIFRVSHAASDRAVKILYSVSRFSATAAVVHEMLQLGVAAK
LCLVTQVDCGSKTKERAKEILKMHAKSWKNSPCIPMNLASSYPSS
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggaagagattcaagttcctccgtattttctttgcccgatttcactggagatcatgaaa
gatccggtgacggtgtccaccggaataacgtacgaccgggagaacatcgagaagtggata
ttctccggcaagaacaacacgtgtccggtgaccaagcaagggattttggacggcgacggt
ggggagttgacgccgaatatcattctccggcggtatattcagtcgtggtgtactctccac
gcggcgcacggaatcgagcggtttccgacgccgaagccgccggtgagccgatcccagatc
gcgaagcttctcaaggacgccgagtcgccgcatatgcaggcggagtgtctgcagcgcctg
cgggtcatcgcgtccgagagcgaggcgaaccgccgctgcatggagagcgccggcgccgcc
gttttcttggcgtcaatcattagaaacaacaacaacggaagcgacgaagccctaagttta
ctccacaaccttagattatccgaagaaagcctaaaatccctcgccggacacgacaattat
tccaacaacctccaattcatcgaatccttaatccgcgccatgcaaacccaaaactacgaa
tcccgagctttcgcagtaatgcttttaaaatcaatcctcaaagtctccgagccattgcag
ctaacaaccttaaaaccttccctctatcacgccacagttcaaatcctaaaagactcaatt
tcccaaaaggcctccaaagccgctctacacattctaatccacgtttccccctgggcgagg
aacagaatcaaagcagtcgaggccggagccacggcggtgttgatagatctcctcctcgaa
tctaccgagaagcggacatgtgaaatgatcttaacgtccctcgatcagctctgccagtgc
gcggaagggcgagcggagctgttgagccatcccgccgggctggccgtcgtgtccaagaaa
atctttagggtttcgcatgcggccagcgatagggccgtaaagattctgtactccgtttct
aggttttcggccacggcggcggttgttcatgagatgttgcagttgggcgtggcggcgaag
ctgtgccttgtgacgcaagttgattgtgggagcaagacgaaggagagggctaaggagatt
cttaaaatgcatgctaagtcttggaagaactctccttgtattcccatgaatttggcttct
tcttacccatcttcatga
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