Ipomoea triloba (trilobed morning glory): 116006169
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Entry
116006169 CDS
T07384
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116006169
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116006169
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Pec_lyase_N
Motif
Other DBs
NCBI-GeneID:
116006169
NCBI-ProteinID:
XP_031102317
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Position
15:complement(285812..288480)
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AA seq
491 aa
AA seq
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MKMMYRRSFIIIFISLLLVTLFSSSSSSSSSTPPLFNLTTLPSQHPNPEAVVQEFQSKVN
ASLWRHLSRRKLLSSGQSCSTGNPIDDCWRCDSNWQLNRQHLAECGIGFGQYAQGGKGGR
YYVVTDSSDPDPVNPPPGTLRFAVIQSEPLWIVFAASMTIRLSQELIFNSYKTLDGRGAN
VHVTGGGCITLQYISNVIIHNIHVHNCYDSGDTNVRSSPTHFGFRSKADGDGISVFGSRD
IWIDHCSLSECKDGLIDVVMGSTGITISNNHFSHHNEVMLLGHSDDYLPDSGMQVTIAFN
HFGQNLVQRMPRCRRGFIHVVNNDFTRWEMYAIGGSGNPTINSQGNRYMAPFDRNAKEVT
KRVDTEEDEWRNWNWRSDGDIMGNGAFFVASGDSVEIQYEKAYSVEPKSANFIDQLTMNA
GVLVGRGGNTGKWTAAGNASSGGSDGGGTDLVAISGDRDDYDGDDSGGGYRLCCYPIVLF
SLITLLTFMVV
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgatgtacagaagaagtttcattattattttcatttctctgctacttgtcact
ttgttttcttcctcttcttcttcttcttcttcaacgccaccacttttcaacctcactact
ctcccttctcagcatcccaaccctgaagctgttgttcaagagtttcaaagcaaagtaaat
gcatcactttggagacatctctcgagaagaaaattgttatcttccggccagtcatgctcc
accggaaacccaatcgacgattgctggcggtgcgactccaactggcagctaaaccgccag
cacctagcggaatgcggcatcggattcggacaatacgcccaaggcggcaaaggcggccgt
tactacgtcgtcaccgactcctccgaccccgacccagtcaaccctcctccgggaactctc
cgcttcgccgtcatccaatccgagcctctctggatcgtcttcgccgccagcatgaccatc
cgcctctcccaggaactcatcttcaactcctacaaaaccctagacggccgcggcgccaac
gtccacgtcaccggcggcggctgcataacgttacagtacatctccaacgtcatcatccat
aacatccacgtgcacaactgctacgactccggcgacaccaatgtacggtcgagtccgacc
catttcgggttccgatccaaagccgacggtgacgggatttccgttttcgggtcgagggat
atttggatcgatcattgctcgttgtcggaatgtaaggatgggctgattgacgttgtgatg
gggtccacggggattactatatcgaataaccatttttcgcaccataatgaggtgatgttg
ttgggtcacagcgatgattatttgccggattctgggatgcaagttactattgcttttaat
cactttggacaaaacttggttcagagaatgccgaggtgcagacgaggattcattcatgtt
gttaacaatgattttacgaggtgggaaatgtatgccattggaggtagcggtaatcccacc
attaatagtcaaggaaatcgttacatggcaccattcgaccgtaatgccaaggaggtgacg
aaaagagtggacacagaagaggatgaatggaggaattggaattggaggagtgatggggac
ataatgggaaacggggccttctttgtagcatcaggtgatagtgtagaaatccaatacgag
aaagcctatagtgtggagcccaaatctgcaaatttcatcgaccaactcaccatgaacgcc
ggtgtccttgttggcaggggaggcaatactggcaagtggactgctgctgggaacgctagc
agtggcggcagcgacggtggaggaacggacttggtagcaatttccggcgatcgggatgat
tatgacggcgatgattccggcgggggctatagactttgctgttaccccattgtactgttt
tccctgataaccttgttaaccttcatggtggtatag
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