Ipomoea triloba (trilobed morning glory): 116006201
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Entry
116006201 CDS
T07384
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116006201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
itr03009
]
116006201
Enzymes [BR:
itr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
116006201
Ribosome biogenesis [BR:
itr03009
]
Eukaryotic type
90S particles
Other 90S particles
116006201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
116006201
NCBI-ProteinID:
XP_031102359
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All DBs
Position
15:complement(2952374..2955807)
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AA seq
280 aa
AA seq
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MVRAYKLKGQKRKKKAEKYDREEEIEQSSEEETAETSKKAKTEDTVADEEEAEKVVDLLA
GIPVVSAEQSKKPGIIFILERASLEIAKIGKTYQLLNSDEHANFLKRNNRNPAEYRPDIA
HQAMLMILDSRLNKAGRLKALYVRTEKGVLFEVKPHVRIPRTFKRFSGIMLQLLQKLNIT
AVGKREKLLRVIKNPVTQYLPIDCRKIGFSHSSEKLVDIHDYVANVDSDTNLVFVVGAMA
HGKIDKDYVEDYISISDYPLSAAYCISMITNALERKWKML
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggtccgggcttacaagttgaaagggcagaagaggaaaaagaaggcggagaagtatgat
agggaagaagaaatagaacaatcttcagaagaggaaacagccgagaccagtaaaaaggcc
aagactgaagatactgtagcagacgaagaggaagctgagaaggtggtggatttactagcc
ggtattccagttgtttcagctgaacagagcaaaaagcctgggatcatttttattctagag
agggcatcactggagattgccaaaattggaaagacttaccaacttctcaactcggatgag
catgccaactttctgaagcgaaataaccgaaaccctgctgagtatcgacctgatattgct
catcaggcaatgcttatgattttagatagccgcttaaataaggctgggagattgaaagct
ttgtatgtgaggacagaaaaaggtgttctttttgaagttaaacctcatgttcgtatccct
aggacatttaagcgattttctggtatcatgttgcaattgctacagaagctgaatattact
gctgttggtaagagagagaagttattacgtgtcataaagaatcctgttacacagtatctt
cctatagattgtcgaaaaattggcttttctcacagttctgagaagttggttgacattcat
gactatgttgctaatgttgatagcgatacgaaccttgttttcgtggttggcgcaatggcc
catgggaaaattgataaagattacgttgaagattatatatcaatttctgattatccactg
agcgccgcgtactgtatatcaatgataactaatgctctcgagcgcaagtggaagatgcta
tag
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