Ipomoea triloba (trilobed morning glory): 116006532
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Entry
116006532 CDS
T07384
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
itr03016
]
116006532
Enzymes [BR:
itr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
116006532
Transfer RNA biogenesis [BR:
itr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
116006532
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GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-GeneID:
116006532
NCBI-ProteinID:
XP_031102806
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Position
15:6095829..6102878
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AA seq
792 aa
AA seq
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MAARAMNSCVIIRSAASPPPTFWSCCPQRQFRTRRFHRYLRLHSRCSLPRYPLSHDGARS
YSVQSLVETVIEELYSMRKRGRIRASTELGLTSTSELLEDKVGKQAMQKGLLLEFKKDSE
RLLLAVALRPDGKKNWIVSDQNGVTTSIKPQQVTFIVPGIENFDPMEISNFVQKAHNNLD
PALLEFAWNELLENKKSVTVEELAEMIFGSAEPLESYCAYLLLSRDDIYFTVLGSKGPQS
IYGPRPVRQVDQLLQKKLAKEAEEKEIEEFVQLLKSIKEMPPHAKPPNSMWKTEEKNWQK
IKSLEAFAIDACKNDDQKRMTGTILKAMGMAKTASAAVTLLIDIGYFPVHVNLDLLKLSI
RTDHPDEIVLAAESLLLESTDLDEVDRVDLTHLKVYAIDVDEADELDDALSATRLEDGRI
RIWIHVADPASLVQPGSIIDKEARRRGTSVFLPTATYPMFPERLAMQGMSLKQGQQCNAV
TVSVILRSDGSIEEYSVENSIIKPTYMLTYESASELLHMNLDEEIELKILSEAATLRFRW
RQQQGAIDASNLETRIKVTNPNDPEPSIKLYVENQSDPAMRLVSEMMILCGEVIATYGSY
NKIPLPYRGQPQSNIDTSAFAHLPEGPVRNSAIVRIMHAAEMDFRKPVRHGILGIPGYVQ
FTSPIRRYMDLLAHYQVKAFIRGDSPPFSAGELEGMASMINMYIRVVRRLCNSSLRYWVL
EYLRRQSKNTKFRAVVLKFIKDRNALILLLEIGTQASVWVSTGVQIGDEVEVRVEEAHPR
DDILCLKEVPRA
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcgcgccatgaatagctgcgtaattatccgctccgcagcgtcgcctccgccg
accttctggagctgttgtccccagcgccaattcagaacgcggcggtttcatagatactta
agattgcattctcggtgctctctcccccgttatcctctcagccatgacggtgctcggagc
tactctgtgcaaagcctggttgagaccgtcatagaagagctctattccatgcgcaaacga
gggagaattcgtgcttctaccgaattgggattaaccagcactagtgagcttcttgaggat
aaagtaggaaaacaagcaatgcaaaaggggttgctgctagagttcaagaaggactctgaa
aggctattgctagcagttgctcttagacctgatgggaaaaagaattggattgtctcagat
cagaatggtgtaacaacctcaataaaaccacagcaagttacttttattgttcctggaatt
gagaactttgaccccatggagatatcaaactttgtccagaaagctcataataacttggat
ccagcactacttgaatttgcttggaatgagcttcttgaaaataaaaaatctgttacagtg
gaagaactggctgagatgatttttggtagtgcggagcctcttgagagttattgtgcctat
ctattattatctagagatgacatatacttcacagttttggggtctaaaggtccacagtct
atttatggacctcgaccagttagacaggtagatcaacttttacaaaagaagctggctaaa
gaggctgaggagaaggaaattgaggagtttgttcagttgctaaaatctattaaagaaatg
cctccgcatgccaaacctccaaactctatgtggaagactgaagagaaaaactggcagaaa
atcaagtctcttgaagcttttgctattgatgcttgcaaaaatgatgatcaaaagagaatg
acagggacgatcctgaaggctatgggcatggcaaaaacagcatcagccgcagttaccctt
cttatagatattggatatttccctgtacatgtcaatcttgatttactaaagctaagcatt
cgtactgatcatccggatgagatcgtattggctgcggaaagtcttttgttagagtcaact
gacctggatgaggttgatagagtagatctcactcacctgaaggtttatgcaattgatgtt
gatgaagctgatgagcttgatgatgcattgagcgcaacaaggctggaggatggccggata
agaatatggatacatgttgcagatccagctagcttagttcagccagggagcataatagac
aaagaagcaaggagaagaggaacttctgtattcttgcccactgctacttatccaatgttt
cctgaaaggttggccatgcaaggcatgagtcttaagcaaggccaacaatgcaacgctgtt
actgtatctgttattctgcgttctgacggcagcattgaagaatactctgtggaaaactca
atcattaaaccaacatatatgctgacatatgagagtgcatctgaacttcttcatatgaac
ctggatgaggagattgagctaaagattctctctgaagctgctacacttcggtttcggtgg
cgtcaacagcagggtgcaatagacgcaagtaacttagaaacacgaattaaggtgaccaat
cccaatgatccagagccatcaatcaagctttatgttgaaaatcagtctgatcctgctatg
cgacttgtttctgagatgatgatactttgtggagaagttatagccacatatggttcttac
aataagatacctttgccctatagaggacagcctcaatcaaatattgatacatctgcattt
gcacatcttccggaagggcctgttagaaattcagctattgttcgaatcatgcatgcagct
gaaatggatttcaggaagccagtacgtcatgggatcttgggaattcctggatatgttcaa
tttacatctcctattcgtagatatatggacctcctggctcattatcaggtgaaagcattt
attaggggtgattctcctcccttctcagctggtgaactagaagggatggcatctatgatt
aacatgtacatcagagttgtaaggaggctctgcaacagcagtcttcgttattgggtattg
gagtacctgagaaggcaatcaaaaaatacaaaattccgtgctgtagtcctcaaattcatc
aaagacaggaatgcattaatactcttgttggagattggaacacaagcttctgtttgggtg
tctaccggagtacaaattggggacgaagtggaagttcgagttgaagaagctcatccacgt
gatgacattctctgtcttaaagaggttccacgtgcataa
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