Ipomoea triloba (trilobed morning glory): 116006640
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Entry
116006640 CDS
T07384
Name
(RefSeq) eukaryotic initiation factor 4A-11
KO
K03257
translation initiation factor 4A
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116006640
03012 Translation factors [BR:
itr03012
]
116006640
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
itr04147
]
116006640
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116006640
mRNA cycle factors
Stress granule specific factors
116006640
Translation factors [BR:
itr03012
]
Eukaryotic type
Initiation factors
eIF-4
116006640
Exosome [BR:
itr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116006640
Exosomal proteins of bladder cancer cells
116006640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
116006640
NCBI-ProteinID:
XP_031102947
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All DBs
Position
15:complement(23246511..23249689)
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AA seq
413 aa
AA seq
DB search
MAGMAPEGSQFDARQFDAKMNEILETDAQEFFTSYDEVYDSFDSMGLQENLLRGIYAYGF
EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSLVECQALVLAPTREL
AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRP
DNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVR
ILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR
GRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
ENYLHRIGRSGRFGRKGVAINFVTKDDDRMLFDIQKFYNVVVEELPANVADLL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaatggcaccagaaggctctcagtttgatgcacgtcagtttgatgctaaaatg
aatgagatcctggaaactgatgcacaggagttctttacatcttatgatgaggtatatgac
agctttgattcaatgggtttgcaagaaaaccttctcaggggcatttatgcttatggtttt
gagaagccctctgcaattcagcaacgtggtattgtgcctttctgcaaggggcttgatgtt
attcaacaagctcaatctggaactggaaagactgcaactttctgctctggaattctccaa
cagctcgattacagcttagttgaatgccaggctttggttcttgcaccaacacgtgagctt
gctcaacaaatcgagaaggttatgagagcacttggtgactatcttggtgtcaaggttcat
gcttgtgtgggaggcaccagtgttcgtgaggatcagcgcattctccagagtggcgttcat
gttgtggttggaactccggggcgtgtgtttgacatgttgcgcaggcagtcccttcgcccc
gacaacatcaagatgtttgtgttggatgaagctgatgaaatgctgtcgagaggttttaaa
gatcagatctatgacattttccaattgctaccaccaaagatccaagttggtgttttctct
gccacaatgccaccagaggcacttgaaatcactaggaaattcatgaacaaacccgttagg
attctcgtgaagcgtgatgagcttaccttggaaggtatcaagcagttctatgtgaatgtt
gagaaagaggaatggaagctcgaaacgctttgtgatctttacgagacgctagccattacc
cagagtgtcatcttcgtaaacaccaggcgtaaggtcgattggctcactgacaagatgcgc
ggccgtgatcacactgtttcggcgactcacggagacatggaccagaacaccagggacatc
atcatgcgggagttccgttctgggtcttccagagttctaatcaccactgatctcttggcc
cgtggtatcgatgttcaacaagtgtcccttgttatcaactatgacctaccgactcagccg
gagaactacctccaccgtatcgggcgtagtggacgattcgggaggaagggtgtcgcgatc
aacttcgttacaaaggatgacgacagaatgctttttgacatacagaagttttataatgtt
gtagttgaggagctgccggctaatgttgcagatctcctgtaa
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