Ipomoea triloba (trilobed morning glory): 116006687
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Entry
116006687 CDS
T07384
Name
(RefSeq) nuclear pore complex protein NUP93A
KO
K14309
nuclear pore complex protein Nup93
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116006687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116006687
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116006687
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_14
TPR_2
PrmA
Motif
Other DBs
NCBI-GeneID:
116006687
NCBI-ProteinID:
XP_031103019
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Position
15:complement(2501833..2511108)
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AA seq
857 aa
AA seq
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MANDTDMSGWSGLLHSSSKLLEQTAPSAQFPPLQRNLDQLEALSKKLKAKTLRAEAPSQS
IAATRLLAREGINAEQLANDLKSFELKTTFEDVFPAEATTVEDYLQQIHEMAMVSAVQEA
QKDNLKNFNDYMMTVLEEDWQKEKRNFLQSLSRISTLPRANISESSPGSARQRPIASLTY
SPQVSSGPSSMELVPLADKSILEKKADAYREVVKNLNTARERGLPFKPATAFKHAYEGLG
LDTSGGKSVSMQKIWHLVLALMGEDATKHNVSRKISLVMGARHHLELGHEKFMMDTIQSH
PAQAALGGAVGNLQRIHAFLRIRLRDYGVLDFDATDAFRQPPVDTTWQQIYFCLRTGYYD
EAREVALQSRASQQFAPLLREWIANGGLVSAETAAAASEECEKMLRLGDRIGRASYDKKK
LLLYAIVSGSRRQVDRLLRELPTLFNTIEDFLWFTLSVVRESPGRSDVLNEGLSPYSLED
LQAYLNKFEPSHYTKNGKDPLVYPYVLLLSIQLLPAVLYLSKDMGNEGYNVDAVHISVVL
ADYGVLSEAGQKVGIMDAFAEASSIIRQYGSLYLRHGDLASALEYYVQAAAAVGGGQLSW
TGRANVDQQRQRNVMLKQLLIELLLRDGGIYLLLGSRGDGDEGQLGIFFTDGKTRQSFLL
EAARQCQDAGLFDKCIEIQKRVGAFSAALDTTNKCLSDAICALSRGRLDGESQVSALIYS
GNEILETFKYYPDISPQEREKVLEQQTVLRQLEAVLSIHNLARLGNHLDALKEVAKLPFL
PLDPRTPGFATDVFQNLSPYVQACVPDLLKVALHCLDNVRDTDGSLRALREKIANFLANN
LGRNWPRDLYEKVAQHI
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgacacagacatgagtggctggagtggacttctacactcttcctctaagctt
ctcgaacaaaccgccccttctgctcagttccctcctcttcagaggaatttggatcagctg
gaagcgttgtcgaaaaagttgaaggctaaaaccctaagagcggaagctccttctcaatca
attgcagccacaaggttactggctcgtgagggaatcaatgctgagcagcttgctaatgat
ctcaaatcttttgagttgaagacaacatttgaagatgtttttcctgctgaggcaactact
gttgaagattatctgcaacagatccatgaaatggcaatggtctctgctgtacaagaagct
cagaaggataaccttaaaaatttcaatgactacatgatgacagtcttggaggaggattgg
cagaaggaaaaaagaaacttccttcagagtctgagtcggatttcaacattgcctagagca
aatatcagtgaatcaagtcctgggagtgctcgccagcgtccaatagcatctttgacttac
agtcctcaggtgtcttctggaccatctagcatggagctagtacctttagctgataagtcc
attcttgagaaaaaagctgatgcgtatagggaagttgtcaagaacctcaacactgcaaga
gagcgtgggctaccctttaaacctgctacagcttttaaacatgcatatgaaggtttgggt
cttgatacatctggtgggaagtctgtaagcatgcagaagatatggcatcttgttctggca
ttgatgggcgaagatgcaactaaacataatgtttcaagaaaaatttccttggtgatggga
gccagacaccaccttgaattgggacatgaaaaatttatgatggatactattcaaagccat
cctgcacaggctgctcttggtggagctgtcggtaatttgcagcgaattcatgcctttctc
aggatccgtttaagagattatggggttcttgattttgatgcaactgatgcttttaggcag
cctcctgttgataccacctggcagcagatatatttttgcttgaggactggatattatgat
gaagcaagagaggttgctctacaatctcgtgcatcacagcagtttgctcctttgctgaga
gagtggattgcaaatggaggtctggtatcggcagagactgcggctgctgcttcagaagaa
tgtgaaaaaatgttaaggttgggtgatcgaataggtcgggcttcatatgataagaaaaaa
ttgctgctatatgcaatagtgtctggttcacgtaggcaggtagaccggctgcttagagaa
ctgcctacacttttcaatactatagaggatttcttgtggttcactttatctgttgtacgt
gagagtcctggcagatccgatgtcctgaatgaggggttgtcaccttatagtttggaagat
ttgcaagcttatttaaataagtttgagccttcacattatactaagaatggaaaggatcct
ctggtttacccgtatgttttgcttcttagtatccaactgcttccagcagtcctgtattta
tcgaaagatatgggaaatgaaggatacaatgtggatgctgtccatatttctgttgtgttg
gcagattatggggtcctttctgaagcagggcaaaaggttgggattatggatgcttttgct
gaagcctctagcataattaggcaatatggatctttatatctgcgccatggtgacctggca
tcggcattggaatattatgtgcaagctgctgcagcagttggtggtgggcagctgtcatgg
actggaagagctaatgtggatcagcaaaggcagagaaatgtgatgttgaagcaactcctc
atagaacttttactgcgtgatggtggtatctaccttctacttgggtccagaggtgacggt
gatgaaggtcagcttggaatatttttcacagatggaaagactagacaatcctttctactt
gaagctgctcgtcagtgtcaggatgctggactttttgacaaatgtatagagattcagaag
agagtgggtgcattttcagcagcattagatacaacaaataagtgcttatctgatgcaata
tgtgctctatcacgtggaaggttggatggggagagccaggtttctgcactcatttattct
ggaaatgagattttggagacattcaagtattatcctgatatcagtcctcaagagagagaa
aaggttttggagcagcaaactgtgttgagacagcttgaggcagtcctgtccattcataat
ttagcaagacttggaaaccatttggatgctttgaaggaagtagcaaaactaccatttctt
cctttggatccaaggacaccgggttttgccactgatgtcttccaaaatttgtctccctat
gtccaagcatgtgttccggaccttctgaaggttgctcttcactgcctagacaatgttaga
gatacagatggatcattgcgagctttaagggagaagatagcgaactttcttgccaataac
ttgggtaggaactggcctcgtgatctatatgaaaaggttgctcaacatatatga
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