Ipomoea triloba (trilobed morning glory): 116006711
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Entry
116006711 CDS
T07384
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
itr03021
]
116006711
Transcription machinery [BR:
itr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
116006711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
Motif
Other DBs
NCBI-GeneID:
116006711
NCBI-ProteinID:
XP_031103055
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All DBs
Position
15:3466553..3478079
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AA seq
542 aa
AA seq
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MGDEAFDGQTLTEKLSKLNSSQQSIESLSRWCTSFRKKAKQIVETWDKLFKSAQKEQRVA
FLYLANDILQNSRRKGSEFVNEFWKVLPAALKQVYESGHESGKKVASRLVDIWEERKVFG
SRGQLLKDEVLGKNPSLPVSNGKNPNPIKVIKRDAHSLRIKLAVGDLPEKIITAFQVVHD
ENTNEKAALNKCKDALSHFKEMEKDIANISSQGTAQGSEMADKIQEQENVLQQCVTQLEN
SEASRVALISQLMEAVQDEESKLELIRNDMKAAHKQIEQAANMRKRLTSPFLPIEAAARA
AEPIPPSAQLTSVVPLPTNPITSFASSKPTDEESKRAAAAAVAAKLAASTSSAQMLTSVL
SSLVAEEAAASMSSGLKRGFSSNLPYGSPEKRPKLDNPATFSDMNKADGGGSAYFSTGMQ
SLPQTNPMPAAFPPPPPPPPIPPANSPPSQLVQSAAMMMGVLPYGYGSAGSLPPPPMPIA
TGLTRPPPLQPPQQPTQQQLQIPQSHSQQQQQQPVSGGFYPPPGFGFYGQSPQTTPPPVP
RQ
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgaagcttttgatgggcaaaccttgactgaaaagttgtctaaacttaacagt
tcacaacaaagcatagaatcgttgtctcgttggtgcacttcattcaggaaaaaagccaag
caaattgttgaaacatgggataaattatttaaatctgcacagaaagagcagcgtgttgca
tttttatatttggccaatgatatcctgcaaaatagtcgtcgcaaaggcagtgagtttgtc
aatgaattctggaaggtcctaccagctgctcttaagcaagtttatgaaagtggtcatgaa
tctgggaagaaagttgcatccagattggttgacatatgggaagagagaaaagtttttgga
tctaggggtcaacttcttaaagatgaagtgctgggtaaaaatccatctttaccagtcagc
aatggcaagaatccaaaccctataaaggttataaagagagatgctcattctttgagaatt
aaattggctgtcggggatcttcctgaaaaaattataacagcattccaggtggtccatgat
gaaaacaccaatgaaaaagctgccttaaataagtgtaaggatgctctttctcatttcaaa
gaaatggagaaagacattgctaacatttcctctcaggggactgcacagggatctgaaatg
gcggataagatccaagaacaggagaatgtacttcagcaatgcgttacccaacttgaaaat
tctgaagcatccagggttgccttgatttctcaactaatggaagcagttcaggatgaagaa
tcaaaactggagcttatacggaatgatatgaaggctgctcataagcagattgaacaggca
gcgaatatgagaaaaaggttgacatctccctttcttccaatagaagcagcagcaagggca
gctgaaccgatcccaccttctgcacagctgacaagcgttgttcctttgcctacaaatccc
attacttcatttgcatcttccaaacctactgacgaggaaagcaagagagcagcagctgcc
gctgttgctgcaaaactcgctgcatcgacatcctctgctcaaatgctgacctctgttctc
tcgagccttgttgcggaagaggctgctgcctctatgagcagtggcttgaaaagaggattt
tcttccaacttaccttacggttctccagagaagaggcccaagttggacaatccggcgact
ttttctgatatgaataaagcagatggaggtggttccgcctatttctctacaggcatgcaa
tccttgccccagacaaatccaatgcccgctgcattccctccaccaccgcccccgccaccc
atacctccggcaaattcccctccaagtcaattggttcaatctgcagctatgatgatgggc
gttttaccctacgggtatggttctgccggtagcctcccacccccacctatgcccatcgca
acgggactgacaaggccgccaccacttcaacctcctcagcagccaacacagcagcagctg
caaatcccgcagtcccattctcagcaacagcagcaacagcctgtcagtggcggtttctac
ccgcccccaggattcggtttctatggacagagccctcaaacaacaccacctcctgttccc
aggcaataa
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