Ipomoea triloba (trilobed morning glory): 116006883
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Entry
116006883 CDS
T07384
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03030
DNA replication
itr03410
Base excision repair
itr03420
Nucleotide excision repair
itr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116006883
03410 Base excision repair
116006883
03420 Nucleotide excision repair
116006883
03430 Mismatch repair
116006883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
itr03032
]
116006883
03036 Chromosome and associated proteins [BR:
itr03036
]
116006883
03400 DNA repair and recombination proteins [BR:
itr03400
]
116006883
DNA replication proteins [BR:
itr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116006883
DNA Replication Termination Factors
ELG1-RFC complex
116006883
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
116006883
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116006883
Check point factors
HRAD17(Rad24)-RFC complex
116006883
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA
Rad17
Sigma54_activ_2
AAA_lid_RFC1
AAA_5
RuvB_N
AAA_22
AAA_23
DUF815
Mg_chelatase
RsgA_GTPase
AAA_2
nSTAND6
AAA_29
AAA_16
ABC_tran
AAA_24
T2SSE
SprT-like
nSTAND3
NB-ARC
TsaE
Motif
Other DBs
NCBI-GeneID:
116006883
NCBI-ProteinID:
XP_031103248
LinkDB
All DBs
Position
15:3698775..3703797
Genome browser
AA seq
354 aa
AA seq
DB search
MLWVDKYRPKTLDKIIVHQDVAQNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIFG
ASADKVKAENKVWKIDAGTRTIDVELTTLSSTHHVELSPGDAGFQDRYVVQEVIKEMAKN
RPIDTKGKKSFKVLVLNEVDKLSREAQHSLRRTMEKYSTSCRLILCCNSSSKVTEAVRSR
CLNVRINAPKEEEIVKVLEFIGKKEGLQLPAGFAARIAEKSNRSLRRAILSFETCRVQQY
PFTNNQAVPPMDWEEYVAEIASDIMKEQSPKRLFQVRGKLYELLSNCIPPDIILKRLLFE
LLKKLDSELKHEVCHWAAYYEHRMHLGQKAIFHLEAFVAKFMSIYKNFLVATFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgggtcgacaagtaccgcccgaaaaccctagacaagatcatcgtgcaccaagat
gttgctcaaaatcttaagaaattggttacagagcaagattgcccgcatttgctgttttac
gggccatcagggtcgggtaagaaaaccctaattatggcccttctccggcagatatttggg
gcaagtgccgataaggtgaaagctgagaacaaagtctggaaaattgatgctggaactagg
actattgatgtagagctcactacattatcaagcactcatcatgtggaattgagtcctggt
gatgctggatttcaagaccgatatgttgttcaagaggtaataaaagaaatggcaaagaat
agacccattgacaccaaaggaaagaagagtttcaaagtattagtgctgaatgaagttgac
aagctctcaagagaagcacagcattctcttcgaagaacaatggagaaatacagcacgtca
tgccgtctgattctttgctgcaacagttcttcaaaagttacagaagctgttcgttctcga
tgcctcaatgtgcgaataaatgcacccaaggaagaagagatagtgaaggttttggaattt
atcgggaagaaagaaggacttcagctcccagcaggatttgctgcccgcatagcagaaaag
tcaaacagaagcctcagaagggcgatattgtcatttgagacttgtcgtgttcaacagtat
ccctttacaaacaaccaagcagtacctccaatggactgggaggaatatgttgcagagatt
gcatcagacataatgaaggaacagagccctaaaaggttgtttcaggttcgaggaaagctc
tatgaactactttctaactgtattcctcctgacattattttaaagaggcttctttttgag
ctcctgaagaaattggattctgagttgaagcatgaggtctgccattgggctgcatattat
gaacataggatgcacttaggacagaaggcgatatttcaccttgaagcatttgtggccaag
tttatgagcatttacaaaaatttccttgttgcaacctttggatga
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