Ipomoea triloba (trilobed morning glory): 116006912
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Entry
116006912 CDS
T07384
Name
(RefSeq) serine/arginine-rich splicing factor SR30-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116006912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
itr03041
]
116006912
Spliceosome [BR:
itr03041
]
Common components
Common spliceosomal components
SR proteins
116006912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
DUF6100
Motif
Other DBs
NCBI-GeneID:
116006912
NCBI-ProteinID:
XP_031103284
LinkDB
All DBs
Position
15:complement(11189195..11195166)
Genome browser
AA seq
308 aa
AA seq
DB search
MGRLSRTIYVGNLPGDTREREVEDLFYKYGHIVDIDLKIPSRPPGYAFVEYEDPRDAEDA
IRGRDGYSFDGHRLRVELAHGGRGSSSYDRKSTYSGRSRGGASRRSEYRVLVTGLPSSAS
WQDLKDHMRRAGDVCFSQVYRERDGMRGIVDYTNCDDMKYAIKKLDDTLFENQYSRAYIR
VEKYDSKLSYTRSPSPYSRSRSYSRSRSPKRRSSESRSVSPRDKSRRSVSRSRSRSISPV
RSISRSVSRSKSPASPAQGQKHAATSRDPSPSRSRSRSLSHPHSVSRDPSRSRSRSRSLS
HPCSERAV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtttaagcaggaccatttatgttggcaatctccctggagatacccgggagaga
gaagttgaagatttgttttacaagtatgggcatattgttgacattgatttgaaaattcca
tcaagaccaccaggttatgcttttgtggagtatgaagatcctcgtgatgctgaggatgct
attcgtgggcgtgatggttatagctttgatgggcatcgcttgcgggttgaactagcacat
ggtggacgagggtcatcatcatatgatcgcaaaagcacctatagtggtaggagtcgtggt
ggagcttcaagacgctcagaatatcgtgttctggttactgggcttccttcttctgcctca
tggcaggatctgaaggatcacatgcgccgagctggagatgtctgtttttctcaagtttat
cgtgaacgggatggcatgagaggaattgtggactatacaaactgtgatgacatgaagtat
gcgataaagaaactggatgacactctattcgaaaatcagtactcccgtgcttacatacgg
gttgagaaatatgatagtaaactaagctacaccaggagtcctagtccatattctaggagc
agaagttactcaagaagccggagtcccaaacgccgtagcagcgagagcagaagtgtatcc
ccaagggataaatctcgtcgatcagtatctagatcacggtcgaggtctatatctcctgtc
cgttctatttcaagatctgtgtcaagatctaaatctccagcatcacctgctcagggacag
aaacatgctgcaacgagtagagaccccagccccagccgaagtcgaagtaggagcctgtct
catccccattctgtgagtagagatcccagccgcagccgaagtcgaagtaggagcctgtct
catccctgttctgagagagctgtttga
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