Ipomoea triloba (trilobed morning glory): 116007187
Help
Entry
116007187 CDS
T07384
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase nop2-like isoform X1
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
itr03009
]
116007187
Enzymes [BR:
itr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
116007187
Ribosome biogenesis [BR:
itr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
116007187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
TRM5-TYW2_MTfase
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
116007187
NCBI-ProteinID:
XP_031103654
LinkDB
All DBs
Position
15:complement(23315205..23320561)
Genome browser
AA seq
688 aa
AA seq
DB search
MAAPKLSKGSSRGVQKSHPKKKQKKDEACLSKKVEKENLLSDAAEITDEELEHETSEGEE
EELGGESDSDMYSEDDAMADDILGGSDDDEGYDDAAEEDSDEGSDSDVSDIEKKARIIDK
EREKVEEEGEAELQLNIREEADEFRLPTSEELEEETQRPPDLSSLQRRVKEIVRVLSNLK
SLRQEGVTRKDYVDQLQRDLASYYGYNDFMIETLVEMFPVVELMELIEAFEKPRPICLRT
NTLKTRRRDLAGVLLNRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGHYMLQGASSF
LPVMALAPQEKERIVDMAAAPGGKTTYVAALMKNGGIVYANEMKESRLKSLAANLQRMGV
TNTIVCNYDGRELPKVLGQNSVDRVLLDAPCSGTGIISKDASVKTSKTADDIQNCARLQK
ELILAAIDMVDANSKSGGYVVYSTCSIMVDEVCGVCRKIILMKSILLTHSSQICNLQNEA
VIDYALKKRDVKLVPCGIDFGRPGFIRFRQHRFHTSLEKTRRFYPHVNNMDGFFVAKLKK
MSNSKRTQTPGEASEETEGNELIDNTEQNAKGDTEKHLDKEGDGKMKYSSTEEVKVKGQS
TTKKRKRPDQKHSLKNFDGKENGKLKASSTVNRKVDNQMAKKGRKERAKPPSREEITKSR
EEKRQAQREAKRKAATERKVKNSKGSKA
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccgaagcttagcaagggaagcagtaggggagtacaaaaatctcacccgaag
aagaagcagaagaaggacgaagcttgcttgtcgaaaaaagtggaaaaagagaatctcctc
agtgatgctgctgaaataactgatgaagagctcgagcatgaaacatccgagggagaagaa
gaagagctgggaggtgaatctgattctgatatgtattctgaagatgatgctatggcggat
gatattctcggaggcagcgatgatgatgaaggttatgatgatgctgcggaggaggattca
gatgaaggctccgattctgacgtttctgatattgagaagaaggcaaggattattgacaaa
gaaagggaaaaggtagaggaggaaggagaagcagaattgcagctcaatatcagggaagaa
gctgatgaatttaggttgcctaccagtgaggaacttgaagaagaaacacaaaggcctcct
gatctctccagtctccagaggagggtaaaagagattgtacgggtgctttcaaatttgaag
tcattgaggcaagaaggagtcacacgtaaggattatgttgaccaacttcagagggattta
gcttcatactatgggtacaatgatttcatgattgaaactttagttgagatgttcccggtt
gttgaacttatggaacttattgaagcctttgaaaagcctcgaccaatatgtcttcgaaca
aacactttgaagactcgtagacgggatttggctggtgtcctgttgaacaggggtgtcaat
ttagatccactaagcaaatggtcaaaggttggattggttgtatatgactcacaagtacca
attggtgcaactcctgagtatatggctggtcattacatgcttcaaggtgcaagttcattt
ttgcctgtgatggctctcgctcctcaggaaaaagaacgcatagtagacatggctgctgct
cctggtggcaaaactacttatgttgctgctcttatgaaaaacggtggtattgtttatgca
aatgagatgaaggagtcaagacttaaatcacttgctgctaatttacagcgcatgggagta
acaaataccattgtttgcaactatgatggtagagagctgcccaaagttttaggtcaaaac
tcagttgatagggtgctgttggatgcaccttgcagtggcactgggatcatatctaaggat
gcgtctgtgaagacttctaaaactgctgatgacatacagaattgtgcccgcttgcagaag
gaattaatccttgctgcaattgatatggtggatgctaattcaaaatcaggaggatatgtt
gtctattcaacgtgctccattatggttgatgaggtatgtggtgtatgccgaaagataatc
cttatgaagtctatattgttaactcattcttcacaaatttgcaatttgcagaatgaagca
gttatagactatgctctgaagaagagagatgtgaaacttgtcccgtgtggaattgatttt
ggccgtccagggtttattcgttttagacaacaccgcttccacacatctttagagaagaca
cgccgattctatcctcatgtcaacaacatggatgggttttttgttgcaaagttgaagaaa
atgagtaattctaagcgaactcagacacccggtgaagcatcagaagaaacagaaggtaat
gagttgattgacaacaccgagcagaatgccaaaggggacactgagaaacacttggataaa
gagggtgatggaaaaatgaagtatagttccaccgaagaagtaaaagtaaaaggccaaagc
actacgaaaaagaggaagagacctgatcagaaacattcactgaagaactttgatggaaaa
gaaaatggaaagttaaaagccagttcaactgttaaccggaaagtagacaatcaaatggct
aaaaaagggaggaaggaaagggcgaagcctccatctagagaggaaattacgaaatccagg
gaagagaagaggcaagctcagagagaggcaaagagaaaagccgccacagaaaggaaagtt
aaaaacagcaaaggaagcaaagcttga
DBGET
integrated database retrieval system
