Ipomoea triloba (trilobed morning glory): 116007330
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Entry
116007330 CDS
T07384
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116007330
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116007330
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
116007330
NCBI-ProteinID:
XP_031103848
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Position
15:complement(187686..189562)
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AA seq
454 aa
AA seq
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MAASTKILWWVYLALLAIAAVIPAATTSADVDDDVWKQREAEARRGLLQAYHPNPENITS
ELNERVSIGLNEMYEDDDSNHNNVTRRELRGKKGHWERCRATNPIDSCWRCHSNWGGRNR
YRLADCALGFAKGTTGGKGGRFYEVTDSSDNDVQEPKPGTLRHAVIQKEPLWITFADSMT
IKLSRELLVQGNKTIDGRGVTVTIAGGAGMTIQFVQNVIIHNIKLGDIKASPGGIIRDAV
DHKGLRTPDEGDGITIFGSHHVWIDHVSMHNCEDGIIDAVAGSTAVTISNCHFTDHDKVL
LFGANNWDPIDKKMQITLVFNHFGKRLHQRMPRCRWGLFHIVNNDYTHWVMYAVGGSSGA
TIISQGNRYIAQPGENFFKQVTHRDCPDDSWKQWTWVSSGDVFKNGAFFKPSGDPKGAEK
YGYRDYLSAQSGKKVGELTKYSGHLGHCRIGLPC
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctctaccaagatactttggtgggtttacttggcgttgttggcaatcgccgcc
gtgataccggcggcaacgacgtcagcggatgtcgacgatgacgtgtggaagcaacgcgag
gcggaggccaggagaggtcttctccaagcctatcaccccaatcctgaaaacattaccagt
gaattaaatgaaagagttagcataggtttgaatgagatgtacgaggatgacgacagcaat
cataataatgtgacgagaagagagttgcggggaaagaaaggacactgggagcggtgcagg
gccacgaaccctattgacagttgctggagatgccattcgaactggggtggccggaatcgt
tacaggttagccgactgcgccctggggttcgccaaagggactaccggcggaaaaggcggc
agattctacgaggttacagattcatcggacaacgacgtgcaggaacccaagcccggaact
cttcggcatgcggtgattcagaaggagcccttgtggatcacgttcgctgatagcatgacc
atcaagctttccagggagcttctggtgcagggcaacaagacaatcgacggccgcggtgtg
accgtgactatcgcgggcggagcaggtatgacgatccagttcgtacagaacgtgattatc
cacaatatcaaactgggggacattaaagcctctccgggcggcatcatcagagacgcggtt
gaccacaaaggtctgaggactccggacgagggagatggaatcaccatcttcgggtcccac
cacgtatggatcgaccacgtctccatgcacaactgcgaagacggaatcatagacgccgtg
gcggggtccaccgccgtcactatttcaaactgccacttcaccgaccacgacaaggttctt
ctcttcggagccaacaactgggatcccatcgacaagaagatgcaaatcacactggtattc
aaccacttcgggaagaggctccaccagagaatgccacgttgccggtggggattgttccac
atagtgaacaacgactacactcactgggtaatgtacgcggtgggtgggtcctccggggcc
accatcatcagccaggggaaccggtacattgcgcagccgggggagaacttctttaagcag
gtgacccacagggattgccccgacgattcatggaagcaatggacgtgggtgtcttcgggc
gatgtgttcaagaacggcgctttctttaaaccatccggagatccgaaaggggcggaaaag
tacgggtaccgtgactatctcagcgcacaatcagggaagaaagttggtgagctcaccaaa
tattcgggtcatcttggtcattgcagaatcggattgccatgctaa
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