Ipomoea triloba (trilobed morning glory): 116007437
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Entry
116007437 CDS
T07384
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116007437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116007437
03036 Chromosome and associated proteins [BR:
itr03036
]
116007437
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116007437
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116007437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
116007437
NCBI-ProteinID:
XP_031103970
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All DBs
Position
15:24632110..24639114
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AA seq
719 aa
AA seq
DB search
MPGMATDSGDLSMVTVPQESENPTVVYPLRHGLKPPIHRASICWARGNTLRVTLLRKPGP
DDAGGGDSEAGGKVVELNLSNTGDEEIDAVRWRKIAYGSVTPFALLQSRKNSMAALSKMS
LDSPPYNAEWSEHVMEYSKEINSLLGNPKSAPTSVIEDPKAVLKEVEEPTCLKGAWELME
MFYADKQSQAWISERLLDWLADYDSLFSGTHPTVHSKVVDFQKDLVALQTIENDPKYWEV
LSSALAVGWLDTVVKLLRLHGSYQFDQLGTRETENGLVEAVAVLISKMPRMRTTLPAGKL
GECYPSKQDFMKAWERWRAQITKLECSAYWLQCDHLQTREGLKNMLQIMLGNASVLSNAT
YHWMELYVSHFLYIRPFTVGLESMYNLARKCMQIKPVSSSHKLMNLVLGIFGENAEVVLA
ECSRSFGPWMMAHAVELLTAGSTQAELLLHEEQPKLGGINLEELHRLAYAEVLSSHVLTW
QIAPIYLTSCMKLGISLLENLLYKQPVQQHQVLLKSIEICRLYELNTVSSNIMRIAGVHH
WKHGKKGPAVFWLQQAHDEVRLNRIAKQLFDFVGKSVSDEGFKQWEGLIELLGSESRTAS
GLEFLNKYRDFRRCLLQVEGYTSTDAAWKAAEALISLMKNPSTPQQFWLPLLHDSLKLLN
WREHPLFNVSQTNLLLNKMQELSMARLRPDFVENDLPSEAVSSVRLALATNLGRAILEE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcatggcgacggattccggcgacctatcaatggtcactgttccacaagaatcc
gaaaacccgactgtggtctaccccctccgccacggccttaaacccccaattcaccgcgcc
tcgatctgctgggcgcgcgggaacactctccgcgtcacactcctccggaagccgggcccc
gacgatgctggcggcggagacagcgaggctggcggaaaggtggtggagttgaaccttagc
aacactggtgatgaagagatcgatgccgtgcggtggaggaaaatcgcctacggttcagtg
actcccttcgcacttcttcagagtcggaagaactccatggctgcgttgtcgaagatgtcg
ttggattctccaccctacaatgctgagtggtcagagcatgttatggagtacagcaaagaa
ataaattctctccttggtaatccaaagtcagctcctacttcagtcattgaagatccaaaa
gcagtcttaaaggaagttgaggagcccacttgtttgaaaggtgcatgggagctaatggag
atgttttatgctgacaagcaatcccaagcttggatctcagaaaggcttcttgattggttg
gctgactatgattctttattctctggaacccacccaactgtccattcgaaagttgtggat
tttcagaaagatcttgttgctttacagaccattgaaaatgatcccaagtactgggaggtt
ttatcatcagcattggcagttggctggttagatacagttgtaaaactgttacgtttgcat
ggatcttatcagtttgaccagctaggaactcgtgagacagagaatggactggtggaagct
gttgctgttcttatatcaaaaatgcccagaatgcgtactactctaccagcagggaaactg
ggcgaatgttacccctccaagcaagactttatgaaggcatgggaaagatggcgagcacaa
ataacaaagttggagtgcagtgcatactggcttcaatgtgatcacctccagactagggaa
ggacttaaaaatatgctgcaaattatgttggggaatgctagtgttctttcaaatgcaaca
tatcattggatggagctttatgtttctcacttcctatatatccggcctttcacagtgggt
ttagaaagcatgtacaatcttgcccggaagtgcatgcagataaagccagtttccagttcc
cacaagttgatgaaccttgtacttgggatttttggagaaaatgcagaggttgttttagct
gaatgttcaagatcgtttggtccctggatgatggcacatgctgtagagctgttaacagct
gggagcactcaagctgaacttcttttgcatgaagagcagcctaaacttggaggaatcaac
ttagaagagctccatcgacttgcttatgctgaagttctatcgtctcatgtgctgacatgg
cagatcgcaccaatttatctgacatcatgtatgaagcttggaatcagcttgttggaaaat
ctattgtacaaacagcctgtacaacagcaccaagttctactgaagagcattgagatatgt
cgtctgtatgaacttaacactgtctcttcaaacattatgaggattgctggagtccaccac
tggaaacatggaaagaaaggccctgcagttttctggcttcagcaagctcatgatgaagtt
cgtttaaacagaattgcaaagcaattatttgattttgttggaaagtccgtctctgatgaa
ggtttcaagcaatgggaaggactaattgaattgcttggttcagagtccaggactgcgagt
ggtcttgagtttttgaacaagtatagggatttcaggcgatgtcttctgcaggttgaaggt
tatacatctactgatgctgcttggaaagctgctgaggcccttatatcactgatgaaaaac
ccttctacacctcaacaattttggcttcctcttctgcatgattcgctaaaattgctaaac
tggcgggagcatcctttgtttaatgtctcccagaccaacttgcttttgaataaaatgcaa
gagttgtctatggcaagattgcgaccagattttgtagaaaatgacttgccatctgaagct
gtgagttctgtcagactggctcttgctactaacttgggacgtgcaatccttgaggaatga
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