Ipomoea triloba (trilobed morning glory): 116007836
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Entry
116007836 CDS
T07384
Name
(RefSeq) ATP-dependent RNA helicase DEAH13-like
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
itr03009
]
116007836
Enzymes [BR:
itr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116007836
Ribosome biogenesis [BR:
itr03009
]
Eukaryotic type
90S particles
Helicases
116007836
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
WHD_HA2
AAA_22
nSTAND3
AAA_23
ATPase
ResIII
AAA_19
AAA_RNF213_3
PhoH
ABC_tran
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
116007836
NCBI-ProteinID:
XP_031104364
LinkDB
All DBs
Position
16:complement(13885723..13888241)
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AA seq
626 aa
AA seq
DB search
MMEQEIMEAINENTCVIICGETGCGKTTQVPQFLYEAGFGSQSDDGRGGIIGVTQPRRVA
VLATAKRVAFELGFHIGKEVGFQVRHDRKVGDNCSIKFMTDGILLREVQNDFLLRRYSVI
ILDEAHERSLNTDILVGMLSRVIRERQREYAEQHKKVMSGGIVSCKEKIYPLKLVLMSAT
LRVEDFVSGGRIFHDPPPVIEVPTRQYPVTTHFSKRTEIVDYVGQAYKKVLSIHKRLPAG
GILVFVTGQREVEFLCQKLRKASKEIVEKNCKEKNEALSMSALKPTEEKDMQEINEAFEV
NENSSHEITDRFNSYDEEHGDTYEDESDMSYDSEDDSDLEVSFDGEDLLNQHSSDSDGKF
AVPLGEDGNLTSLKAAFEALAGKKAFASGSTGREVAPVTAEGESNASSSQLSNSMVAPSI
HRAGPMCVLPLYAMLPASAQLRVFEEVKEGERLIVVATNVAETSLTIPGIKYVVDTGREK
VKRYNSSNGMESYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFNDIFSPFSDAEIL
KVPVDGVVLLMKSMHIGKVANFPFPTPPEPTALVEAERCLKVLEALDVKGRLTPLGKVIP
SHHFSHILLQAIWIRLCLFELHNKRI
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcaggagataatggaagccattaatgagaatacttgtgtaattatatgtggt
gagactggttgtggcaagactacccaagttccccagtttctttatgaagctggatttgga
tcccaaagtgatgatggtagagggggcattattggtgttacccagccccgccgtgttgct
gtacttgcaactgccaaacgagtggcatttgagcttggcttccatataggaaaagaggtt
ggctttcaagttcggcatgataggaaggtgggggataattgctcaatcaagttcatgaca
gatggaattttgcttcgagaagtgcagaatgattttctgttaagacgttactcagtcata
atcttggatgaagctcatgagaggagcttgaacacagatatacttgttggaatgctttct
cgtgtaataagagagcgccagagggaatatgcagagcagcataagaaagttatgtcagga
ggtatagtaagctgcaaagaaaagatatatcctctgaaacttgtgctgatgagtgctaca
ttgcgggttgaggactttgtgtctgggggaagaatttttcatgatcctccacctgtaata
gaagtcccaacgcgacaatacccagttactacacacttctctaagagaactgagattgta
gattatgttggccaagcttataaaaaagtattgtctatccacaaaaggctgcctgctggt
ggcatacttgtttttgtaactggacagagggaggttgagttcttgtgccagaagctacgt
aaagcttctaaggaaatagttgagaaaaattgtaaggaaaaaaatgaggcactttcaatg
tctgcattaaaacccaccgaagaaaaagatatgcaggagataaatgaggcatttgaggta
aatgagaattctagtcatgaaataacggatcgttttaattcctatgatgaggagcatggg
gatacctatgaggatgaatcagatatgtcctatgattcggaggatgatagtgatctggaa
gtcagttttgatggggaggatctgttaaaccagcattcctcggactctgatgggaaattt
gcagttcccttgggagaagatggaaaccttacttcattgaaggctgcttttgaagctttg
gctgggaaaaaagcctttgcgtctgggtctactggaagagaagttgctcctgtcactgct
gagggtgaatcaaatgcctctagttcccaattgagcaacagcatggttgctcccagtatt
catcgtgctggtcctatgtgtgttctacccctctatgccatgcttcctgcatctgctcag
cttcgtgtatttgaagaagtcaaggagggagagcgccttattgttgttgctaccaatgtg
gctgagacctctttgacaattccaggtataaaatatgtggttgacacaggtagagaaaaa
gtaaaaaggtacaactcctccaatgggatggaatcatatgaagtccagtggataagtaag
gcttcagctgcccaacgtgcagggagagcaggaagaactggacctggtcattgctatcgc
ctttattcatcagcagtctttaatgacatattctctcccttctcagatgctgaaatattg
aaagtgcccgtggatggtgttgtgctccttatgaaatccatgcatattggcaaggttgca
aatttccctttcccaacacctcctgagccaactgccttagttgaagcagagcgatgctta
aaagttcttgaagcacttgatgtcaaaggaaggttgacgcctcttgggaaggtcattcct
tctcatcacttctctcacattttgcttcaagccatctggatcagactgtgtttgttcgaa
ctccataacaaaaggatttga
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