KEGG   Ipomoea triloba (trilobed morning glory): 116007950
Entry
116007950         CDS       T07384                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116007950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:itr03041]
    116007950
Spliceosome [BR:itr03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    116007950
 Complex B
    116007950
 Complex C
   U2 SnRNP specific factors
    116007950
SSDB
Motif
Pfam: PRP21_like_P
Other DBs
NCBI-GeneID: 116007950
NCBI-ProteinID: XP_031104470
LinkDB
Position
16:complement(11206884..11209620)
AA seq 461 aa
MSGVEEEEFVEPGKEVEMEMDEEEVQLVEEGMRAATLEENAVQNSEVKAITEDQEPPMRI
VKNWKRPEERIPAERDPTKYVVSPITGELIPIIEMSEHMRISLIDPKYKEQKERMFAKIK
ETTLAQDDEISRNIVGLARTRPDIFGTTEEEVSNAVKAEIEKKKEEPKQVIWDGHTGSIG
RTASQAMSQNNAEDQYDFANDARNLPGPQAPLPPRPGVPSVRPLPPPPGLALNIPRPPNS
FPYPTPGNPGVMPPPLPRPPMVNTVPHVQPPPPNIPPMPGQHLMVNRPAMHPSMSMNAPN
ISLPPPPGSQFTPLGAPRAFVPHPMSQPGMTIVPPPPMPHGMPPPPPPEEAPPLPEEPEP
KRQKLDESVLIPEDQFLAKHSGPACISIAVPNVDEGNLKGQVLEITVQSLSETVSAQLGT
VTRLPVHPASPVLLTKNGPLGAVDSEARLNEAAAPSYLFKV
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgtctggtgtggaggaagaagagtttgttgagccagggaaggaggtagaaatggagatg
gatgaagaagaggtgcagcttgttgaagaaggtatgagagctgctacccttgaggagaac
gctgttcagaattctgaagttaaggcaattacagaggaccaggagccaccaatgagaatt
gttaagaattggaaaaggcctgaagaaaggatccctgcagaaagagacccaacaaagtat
gttgtctctcctataactggtgagctgattccgattattgagatgtccgaacatatgagg
atctctcttattgatcccaagtacaaggagcagaaagagagaatgtttgcaaagattaag
gagacaacccttgctcaggatgatgaaatttctagaaacattgttgggcttgctaggaca
cgtcctgatatttttggtaccacagaagaagaagtttcaaatgcagtcaaggctgagatt
gagaagaaaaaagaagagcccaaacaagtcatatgggatggccacacaggtagcattggt
cgcactgctagccaggcaatgtcccaaaacaatgcagaagatcagtatgattttgcaaat
gatgcaaggaaccttcctggccctcaagctccactccctcccaggcctggtgtgccatca
gttcgaccacttcctccaccacctggtttggcactaaatattcctcgtcctcctaatagt
ttcccttatccaacccctggtaatcctggcgttatgcctccacctcttcccaggcctcct
atggttaacacggtgcctcatgtgcaacctccacctcctaacatcccacctatgcctggg
caacatcttatggtaaatcgtcctgcaatgcacccgtcaatgtccatgaatgctcctaac
atttctttaccaccaccacctgggtctcagtttacacctctgggtgctcctcgagccttt
gttccccatcccatgtcccagcctgggatgactattgtcccaccacctccaatgccccat
ggaatgcctccaccacctccacctgaggaagctccaccacttccagaggaaccagagcct
aaaaggcaaaagcttgatgagtctgttctcattcctgaagaccagttcctggctaagcat
tcaggacctgcctgtatcagcattgctgtgccaaatgttgatgaaggaaatctcaaaggg
caagtattggagatcacagtgcaatccttgtctgaaactgttagcgcgcagttgggcacc
gtaacccggcttccggttcatcccgcatcgccagttctgcttaccaaaaatggcccactt
ggagctgttgattccgaggcgcggctcaacgaagcagccgcgccgtcctacctatttaaa
gtttga

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