Ipomoea triloba (trilobed morning glory): 116009748
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Entry
116009748 CDS
T07384
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00040
Pentose and glucuronate interconversions
itr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116009748
Enzymes [BR:
itr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
116009748
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
116009748
NCBI-ProteinID:
XP_031104736
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All DBs
Position
2:2141214..2146618
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AA seq
491 aa
AA seq
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MLLPGSATCIFLFCFFSLTPLISATHNLTLPHQHPYPEVVAQEVQRRVNESISRRLLLPT
ISKDQCLTGNPIDDCWQCDPNWGNNRQRLADCAIGFGQAAMGGKGGMIYVVSDSSDADAV
NPKPGTLRHAVIQTEPLWIIFAADMTIKLKHELIVNSYKTIDGRGVNVQITGNGCITLQY
VSNVIIHNIHVYNCLPSGNTIIRSSPTHAGWRGRSDGDGISLYGARNIWIDHCALSHCTD
GLIDAIMGSTAITISNSYFSHHDEVMLLGHEDGYMPDSGMQVTIAFNHFGEGCVQRMPRC
RRGYIHVVNNDYTEWQMYAIGGSANPTINSQGNRYIAPVDPNAKEVTKRVDTNEGEWSDW
NWRTEGDMMINGAYFVPSGNGLSNEYAKASSLDPQSAVLIDQLTMHAGVFGGPRGDNSIP
ISYGGGTTTGATSNSHARPTGGDSADDPFGMIFGNAAAPPSSPPPIATTIFFLSLLIIPN
LYLNIATNQGG
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttcctggcagtgccacctgcattttcttgttctgttttttctctttgactcct
cttatcagtgccacccacaacctcacccttccccatcaacacccttatcctgaggtggtg
gctcaagaagttcaaaggagagtgaatgaatcaatctcgcgaagactcctgctgccgacg
atttcgaaagaccaatgcctcaccggaaaccctatcgacgactgctggcagtgcgaccct
aactggggaaacaaccgacagagattagcggattgcgccatagggttcgggcaagccgcg
atgggcggcaaaggcggaatgatctacgtggtctccgattcctccgacgccgacgccgtg
aacccgaagccgggcactctccgccacgccgtgatccaaacggagccgctctggatcatc
ttcgccgccgacatgaccatcaagctcaaacacgagctcatcgtcaatagctacaagacc
atcgacggccgcggcgtcaacgtccagatcaccggcaacggctgcataacgctccagtac
gtcagcaacgtcatcatccacaacatccacgtctacaattgcctcccctccgggaatact
atcatacgctcgagcccaacgcacgccgggtggagaggcagatccgacggcgacgggatc
tccttgtacggcgccaggaatatctggattgaccactgcgctttgtctcattgtaccgac
ggcttaattgatgccataatggggtccaccgccatcaccatctcaaacagctatttctcc
caccatgatgaggtcatgctcctcggacacgaagacggatacatgccggactccggcatg
caggtgacaattgcgtttaatcactttggggaagggtgtgtgcaaaggatgccaaggtgc
aggagaggatatatacacgtggtcaacaacgattacactgaatggcaaatgtatgctatc
ggcggtagcgctaaccccaccatcaacagccagggcaaccgctatattgcgccggttgat
ccaaacgccaaggaggtgacaaagcgtgtggacacaaatgagggggaatggagtgattgg
aactggaggacagagggagacatgatgataaacggagcctacttcgtgccctctggtaac
gggctcagcaacgagtatgccaaggcctctagcctcgatccccaatctgccgttcttatt
gatcaactcaccatgcatgccggagtctttggcggtcctaggggagacaacagcattccc
atatcctatggtggcgggaccaccaccggcgcaaccagcaacagccatgctaggcccacc
ggcggtgatagtgcagacgaccccttcggaatgatattcgggaacgccgccgctccacca
tcatcaccccctcctattgcaaccaccattttcttcttgtctctcttaattattccaaat
ttgtaccttaacattgccaccaaccaaggtggctaa
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