Ipomoea triloba (trilobed morning glory): 116009750
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Entry
116009750 CDS
T07384
Name
(RefSeq) zinc finger protein MAGPIE-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
itr03000
]
116009750
Transcription factors [BR:
itr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116009750
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_STOP2_C
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2H2_4
CDK5_activator
Motif
Other DBs
NCBI-GeneID:
116009750
NCBI-ProteinID:
XP_031104738
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Position
2:complement(5098749..5101288)
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AA seq
484 aa
AA seq
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MTEKEALLSSNALTTQTPIPAGSNPPCPPPKKKRNLPGNPDPEAEVIALSPKTLMATNRF
LCEICGKGFQRDQNLQLHRRGHNLPWKLKQRSSKEVRKRVYVCPEKSCVHHHPSRALGDL
TGIKKHYCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTVFSRKDSFITH
RAFCDALAEETARVTAASNMQNAAAVAALGSNINYHFIGAAAPAIGPGMAAPPHFGSIFK
PTIIGNDENMNPVRQGQLPLWMAAAPGQTTTSSQGQEFQSFVGSENPMVTTPLSSSGSFQ
LNWNNLVGNNKISTSNSNSTNNNNGEEMDGNHQSQVMSVPIPSLFSTQHRPHHHHHQTPS
ANMSATALLQKAAQIGATTSDPAFLGSLGLQVNNNNSNSNNNNQVVVQDNNNGNDNKFSG
LYAATSISMVSSHLGSEMESHVQMYPSKRRHIQQNEGGGGGQTRDFLGVGVQSICHPSSI
NGWI
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgacagagaaagaagctttactctcatcaaatgctctcactactcaaaccccaatccct
gcaggatccaatcccccttgccctcctcctaagaaaaagagaaaccttccaggaaaccca
gatccagaagctgaagtgattgctttatcgccaaagacgctgatggcaactaaccgattt
ctgtgtgaaatttgtgggaaagggttccagagggatcagaatcttcagctgcacagaaga
gggcataatctgccatggaagctgaagcaaaggagcagcaaagaagtgcggaagcgcgtg
tacgtttgcccggaaaagagctgcgtccaccaccacccttccagggctctcggcgacctc
accggaatcaagaaacactattgccggaaacacggcgagaagaagtggaaatgtgagaaa
tgctctaagcgctacgccgttcaatccgattggaaagcccactccaagacttgtgggact
agggaatatagatgcgactgtgggactgttttctcaaggaaagatagcttcataacacac
agggcgttttgcgatgcattagcggaagagacagcgagagttacagccgcgtccaatatg
caaaacgcggcggcggtggcggctctagggagtaacatcaactaccactttataggagcg
gcggcgccggcgatagggcccggaatggcggcgccgccacattttggttccattttcaag
ccaacaataataggcaacgatgaaaacatgaatccagtgagacaagggcagctgccgctg
tggatggcggcggctccggggcagacgacaacatcgtcccaaggtcaagagttccaatct
tttgttggttcggagaatcctatggtcactactccgctttcctcgtccggcagttttcag
ttgaactggaataatctcgttgggaacaacaagattagtacctcaaactcaaacagtact
aataacaataatggtgaggagatggatgggaatcatcagtcacaggttatgagtgttcca
attccatccttgtttagcacccaacaccggcctcatcatcatcatcatcaaacgccttct
gcaaacatgtcggccacggccttgttgcagaaggctgctcagattggagccaccacgagt
gaccctgcattcctaggaagcctaggattgcaggtcaacaacaacaatagcaacagcaac
aacaacaaccaggttgtcgttcaagacaacaacaatgggaatgacaacaagttttcagga
ttatatgcagcaacctcaatctcaatggtttctagtcatctcgggagtgaaatggagagc
catgttcagatgtacccttccaagcgtcgacacatacaacagaatgaaggaggaggagga
gggcaaactagggatttcttgggagttggagtacagtcaatctgccacccttcatcaatc
aacggatggatatga
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