Ipomoea triloba (trilobed morning glory): 116009814
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Entry
116009814 CDS
T07384
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
itr03036
]
116009814
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
116009814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mcl1_mid
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Ctf4_C
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_EML
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_ELP1_1st
NBCH_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Tricorn_2nd
Beta-prop_VPS8
WD_LRWD1
Beta-prop_WDR41
Beta-prop_SCAP
Histone_HNS_N
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
116009814
NCBI-ProteinID:
XP_031104811
LinkDB
All DBs
Position
2:14352630..14357996
Genome browser
AA seq
975 aa
AA seq
DB search
MKIRSIKLREAHKNSSGDASVCSILWDQSGDHIVTASSSDSSICIHDAIFAATPPKVLRN
HRDGVTALALSSNSTCLASGSVDHSVKLYKFPSGEFETNITRFTLPLRALAFNKLGTMLA
AAGDDEGIKLINTIDGSVARVLKGHRGSVTGIAFDPKSEYLASVDSRGTVIHWELQSGRI
IHTLKDIAPVTRLGDAFINMLSWSPDGELLAVPGLKNDVVMYDRDTAEMLFSLRGDHVQP
ICYLSWSPNGKYMATSGLDKQVLIWDVDKKQDIDRQKFDNMICCMAWKPQGNTLAVIDAM
GKFGLWESAVPSSMKSPTEDVPSWGSKGSNGLLLFDEEEEPSAAGSLSDPGEDSHDESDL
PSRKRLRKQSICDDDWEDFNELDSFAKLESRKKPAHGHQASLDRKKAELKSTAVSTGLKM
QEAFQPGATPVQPGKRRFLCYSMLGSITTMEHEGYSHIEIDFHDTSSGPRVPAMTDYFGF
TMSALNENGCAFANPCKGEKNMSTLMYRPFSSWANNSEWSMRFEEEEVRAVALGNAWVAA
ITSLNFLRIFSDSGLQRYILSLDGPVVTAAGFKDELAVVTHASPSLPSNEQVLEFRVFNI
RNGTQPLRGRLPLTPGSSLTWFGFSEEGHLSSFDSKGVLRVFINQFGGNWLPLFSESKLK
KPEEKYWVVGLNASKLFCVVCKSPDSFPQATPKPVLTLLDLSFPLASSDLGAENLENEFI
LNNMHLCRVQKAIEEKIAVGQDSTLLDDEAFNLETALDRCILRLIASCCNGDKLERATEL
VKLLSLEKSVKGAIKLVTALKLPNLAERFSTILEERLSNEAMASSVVAESNLNYSSFRAN
AVSNITPESSKTLHILSTTPSSSTRKAGLPEQPAQARAIPSAKAGEVRISTEDSKTRAIP
SAKAGEVRISTEDLKSHKKVNDGEKVEKMKVKNEGVDGMKPVRPSNPFAKSSNTQHTPSL
FDSLKKMNGESTSKK
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcgctccattaagcttcgggaagcccacaagaacagcagcggcgacgcctcc
gtatgctccattttgtgggaccagagcggcgaccacatcgtcacagcctcctcttccgat
tcctcgatttgcattcacgatgccatttttgccgccactccgcccaaagttctgagaaat
cacagagatggtgtcaccgctctggctctcagctctaattccacctgcctcgcctccggc
tccgttgaccattccgtcaaactctacaaattcccaagtggagagtttgagacaaacatt
actagatttacattgccgttaagggcacttgctttcaacaaattgggtactatgttagca
gctgctggtgatgatgagggcattaaactcataaatactattgatggttcagttgcaaga
gttcttaaagggcatcgagggtctgtcactggcatagcttttgatcctaaaagtgaatat
ctggcttcagttgattccagagggactgtcatacattgggaacttcagtcaggaagaata
attcataccctaaaagacatagctcctgtcacacgtttgggcgatgctttcataaatatg
cttagctggagtcctgatggagagctactagctgtccctggtttgaagaatgatgtggtg
atgtatgatagggacactgctgaaatgctgttttcactgcgaggtgatcacgtgcagcct
atttgctatttatcatggtcacctaatggaaagtacatggctacttctgggttagataag
caggttttgatatgggatgttgataagaaacaagatattgataggcagaaatttgacaat
atgatatgttgtatggcatggaagccacagggaaatactttggcggtcattgatgctatg
gggaaatttggtttatgggaatcagctgtgccttcatcaatgaaatctcccactgaagat
gttcctagctggggatcaaagggtagtaatggattacttctgtttgatgaagaagaagaa
cccagtgcagctggtagtttgagtgatcctggggaagatagccatgatgaatctgatctg
cctagccgaaaaagattacggaaacagtctatttgtgatgatgactgggaagattttaat
gagttggattcatttgcaaaacttgaatctcgcaaaaagcctgctcatggtcaccaagct
agcttggataggaagaaagctgaattaaaaagcactgccgtatcaaccggcctgaaaatg
caggaagcttttcagccaggagctactcctgtgcaacctggaaagaggcgctttctctgt
tacagtatgcttggtagtataaccactatggagcatgaaggatattctcatatagagata
gattttcatgatacaagtagtggcccacgagttcctgctatgactgattactttggcttt
accatgtctgctttaaatgaaaatggatgtgcatttgcaaatccgtgcaagggtgagaag
aacatgagcacgcttatgtatcgtccattcagtagctgggctaataacagtgagtggtcc
atgagatttgaagaagaagaagtgagggctgtggcacttggaaatgcatgggtagctgcc
attacaagtcttaattttcttcgcatcttttctgacagcggtttgcagagatatattctc
tctcttgatggaccagtagttactgcagcaggattcaaggatgaacttgcagttgtcacg
catgcctctccttctcttccctctaatgagcaggttcttgaatttagggttttcaatatt
cgcaatggtacacaacctctacgagggagactcccattgactcccggttcctctttaaca
tggtttggattcagcgaggaaggccatctaagttcttttgattctaagggtgtgttgagg
gtcttcataaatcaatttggaggcaattggcttcctctcttcagtgaaagtaaactgaag
aagccagaagagaaatattgggttgttggattaaatgcaagcaagttgttttgtgttgtt
tgtaagtcccctgattctttcccacaggccactcctaaaccagtcctcactttattagat
ctttcctttcctcttgcttcctctgatctcggagcagaaaatctggagaatgaattcata
ttgaataacatgcatctatgcagggttcagaaagcaatcgaggaaaagatagcggttggg
caggacagcacgttgcttgatgacgaggcattcaaccttgaaaccgctcttgatcgatgc
atcttgaggctcattgcatcctgctgcaatggtgacaagctggagagagcaactgaacta
gtcaaacttctttcactggaaaaatcagtgaaaggggcaataaagcttgttacagccctg
aagctaccaaacttggcagaacgcttcagcaccatattggaggaacgtttaagcaacgaa
gcaatggcgagcagcgttgtagctgagtcaaacctgaactactcttccttcagagccaat
gctgtgtccaatattacaccagaaagcagtaaaacactgcacattttatcaacaacccct
tcctcctctacaaggaaggcgggattgccagagcaacctgcacaagcccgagctattcca
tcagccaaggcgggagaggtgagaatcagcacagaagattcaaagacccgagctattcca
tcagcaaaggcaggagaggtgagaatcagcacagaagatttaaagagccataagaaggtt
aatgatggagagaaggtggaaaagatgaaggttaaaaatgagggagttgatggaatgaag
ccggttcgcccttctaatccctttgccaagtcatcaaacacccaacatactccatccttg
tttgactccctcaagaagatgaatggtgagagcacaagtaaaaagtag
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