Ipomoea triloba (trilobed morning glory): 116009937
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Entry
116009937 CDS
T07384
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
itr03021
]
116009937
Transcription machinery [BR:
itr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
116009937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
116009937
NCBI-ProteinID:
XP_031105007
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All DBs
Position
2:585831..592460
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AA seq
689 aa
AA seq
DB search
MDSYRPFQPPSQPAFAPPPPPPPNQNPLQPPPPASTAGQPRGNQPSQNWGGYGNYQHAPP
HFSGPIPLPPPPQSHQYPPPPPPPDSSYPPPPPPPQAAPPAPPVYYPSSQYSQYNQHQHL
QPPPPPPPPSSPPPNSAIPPPPPPSSPPPPPSSAPPAHPSNESRPAAEKAAPKDGRDSGW
RESGHGNHGIPSKQKPPVPPMQVKKPNAPSGRVETEEERRLRKKREYEKQRHEEKHRHHL
KESQNKVLQKTQMLTSGAKGHGSISASHMADRRTAPLLSGERTENRLKKPTTFLCKLKFR
NELPDPTAQPKLMSLRRDKDRFTKYTITSLEKMHKPQLYVEPDLGIPLDLLDLSVYNPPK
GERTPLDLEDEALLRDDDPVTPIKKDGIKRKDRPTDKGVSWLVKTQYISSLSMDSTKQSL
TEKQAKELRENKGGQNILENLNNRDRQIKEIKASFEACKSRPVHATNPKLQPTKVLPLFP
DFDRYKDQFVVATFDSAPTADAENYSKLDKAIRDEHESRAIMKSFVARNSDAAKPDKFLA
YMVPSPNELEKDMFDENEDISYAWVREYHWDVRGDDTDDLTTFLVATGKSEARYMPVPTK
LSLRKKRAREGKSIEEVEQFPIPARVTVRNRQTVAAIELKDEGGYSSFKGSGSDSKRSRM
SLEDGLHSEKGMHDSDEDQSSGGEYELSD
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggattcttataggccattccagcccccgtcgcaacccgcgtttgctcctcctcctccc
ccaccgccgaatcagaatcctctgcaacctcccccgccagcatccaccgcagggcagccg
cgagggaatcagccatctcagaattgggggggatacggtaattatcaacatgcgccgccg
cattttagcggccctattccgctgccaccaccaccccagtctcatcagtatccgccaccc
ccgcctccgccggattcttcgtaccctcctccaccaccgccaccacaagctgctccccca
gctccaccagtgtattatccttcttctcaatactcgcaatacaaccaacaccagcattta
caacccccacctccacctcctccaccttcctctcctcccccaaattcagcaattcctcct
cctccgccaccttcttcacccccaccacccccttcctcagctccccctgcgcatccaagt
aatgaaagcaggcctgcagctgagaaagcagctcccaaggatggaagggattctgggtgg
cgagaatcagggcatgggaatcacgggataccctctaagcagaaacctcctgttcctccc
atgcaagtgaagaaaccaaatgctccttctggaagagttgagacagaggaagagaggagg
ttgcggaagaagagagagtatgagaaacaaaggcatgaagagaaacataggcatcattta
aaagaatcccagaacaaggtgctgcagaagacccaaatgctaacttctggagcgaagggt
catggttccattagtgcatcacacatggctgacaggagaactgctcctttgttaagtggg
gagagaactgaaaatcggttgaagaagccaacaacatttctctgcaagctgaagttccga
aatgaattgccagatccaacagcacagccaaagctcatgtctttaagaagagacaaagat
agatttaccaaatacaccatcacttcattagagaaaatgcacaagcctcaactatatgtt
gaaccagatctcggaatccctcttgacctgcttgatctcagtgtatataacccccccaag
ggtgaaaggactcccctggatctcgaggatgaggccttgttgcgtgatgatgatcctgta
acccctatcaagaaagatggcattaaaaggaaagacaggccaactgacaagggtgtttct
tggctagtcaaaacacaatatatatcttctctaagcatggattcaacaaaacagtctctg
actgaaaagcaagcgaaggaattacgagaaaataaaggaggccaaaacattttggagaac
cttaataacagggatagacaaataaaagaaattaaggcttcttttgaggcatgcaagtca
cgacctgttcatgcaaccaatccaaaactacagcctactaaagttttaccccttttccca
gactttgatcggtacaaagaccagtttgtggttgctacatttgatagtgctcctactgct
gatgcagaaaactatagcaagttagacaaggctattcgagatgaacatgaatctcgggca
attatgaaaagctttgtcgcaagaaactcagatgctgctaaacctgataaatttctggca
tatatggtcccttcacccaatgagctggagaaggatatgtttgatgaaaatgaggatatc
tcgtatgcatgggttcgcgaatatcactgggatgtacgtggtgatgacacagatgatcta
accacattccttgtggccactggcaaatcagaggcacgctacatgcctgttccaacaaaa
ctctcattgagaaaaaagagggccagagaaggaaaatcaatcgaagaagtagaacagttt
cccatacctgcaagagtgacagtaaggaatagacaaacagtagctgccattgaattgaaa
gatgaagggggttattcaagtttcaaggggagtggttcagattctaagagatcaagaatg
agcttggaagatggtttacattcagagaagggtatgcatgacagtgatgaagaccaatct
agtggcggtgaatatgagttatctgattga
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