KEGG   Ipomoea triloba (trilobed morning glory): 116010149
Entry
116010149         CDS       T07384                                 
Name
(RefSeq) protein SPA1-RELATED 4 isoform X1
  KO
K26557  protein SPA1-related 3/4
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:itr00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    116010149
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:itr04121]
    116010149
Ubiquitin system [BR:itr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    116010149
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 EIF3I Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Pkinase Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_SCAP NBCH_WD40 WD40_like PK_Tyr_Ser-Thr
Other DBs
NCBI-GeneID: 116010149
NCBI-ProteinID: XP_031105283
LinkDB
Position
2:complement(6917469..6924527)
AA seq 893 aa
MEGSSESGWQRSDSSRGLNSLPFSDRNLRLLHGSSIRSSSNASLDSGIIPARKGRERVLL
PQTNRLSAHTGFSEDGLAPGRVSSGLDGREVSLRKWLDNPERTVDALECLHIFTQIVEIV
NMAHSQGIVVHNVRPSCFVMSSFNRVAFIESASCSNSSSDSLEDGLNSQTAQCKGSTSPL
PRESVQEGRQSLTQRLQPGRNTTNPSPIVSEAICQQQQSGHAMPCSDGNKNQQTEEVEEE
KKHPFPMKQILLLETNWYTSPEEVAGAPSSCASDIYRLGVLLFELFCTFSSQEEKSTTMS
SLRHRVLPPQLLLKWPKEASFCLWLLHPEPSSRPNLGELLQSEFLNNPRENFEDREAAIE
LREKIDEQELLLEFLLLTQQRKEEAADNLKETISFLSSDIEEVTNMQTALRKKGGSNMEV
GKDPASNRTNKTDDDDSGNSGSRKRSRPGICTCNLEESGDHPDKYQISKTGVENQGSFLS
KSSRLMKNFKKLESAYYLMRRRAVKPTDKPSNRHSQISSDGRGSIVATERSSVSNLSSKP
NSDKETPSGWINSFLEGLCKYLSFSKLEVKADLKQGDLLNSSNLVCSLSFDRDGEFFASA
GVNKKIKIFEYNSILNEDHDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD
VSRSQLFMEMREHERRVWSVDFSVADPTMLASGSDDGSVKLWNINQGVSVGTITTKANVC
CVQFPFDSGHSLAFGSADHRIYYYDLRNAKMPLYTLIGHNKTVSYVKFIDSTTLVSASTD
NTIKLWDLSMCSSRILDCPLQSYTGHMNVKNFVGLSVSEGFIATGSETNEVFIYHKAFPM
PAFVSNKFTSTDPLSGDVVEDAAQFISSVCWHGKSSTLVAANSMGNIKLLEMV
NT seq 2682 nt   +upstreamnt  +downstreamnt
atggagggttcatctgagtctggttggcagaggtctgacagttccagagggctgaattcc
ttgcccttcagtgatagaaatctgagattgcttcatggaagctctataaggtcatctagt
aatgcatcacttgattctgggattataccagcaagaaagggaagggagagagttctgtta
cctcaaacaaatagacttagtgcccatactgggttttctgaggatgggctagcgcctggt
agagttagcagtggcttagatggtagggaggttagtttgagaaagtggttggacaatcca
gaaagaacagttgatgcacttgaatgtttgcacatattcacccaaattgtagaaattgtt
aacatggcacattctcagggaattgttgttcataatgtacggccctcgtgctttgttatg
tcctcattcaaccgtgttgcttttattgaatctgcgtcctgctccaattcctcttcggat
tcacttgaagatggattaaacagccaaaccgcacagtgtaagggttcaacttcacctctg
cctcgtgaatctgtacaagaaggaaggcagtcgcttactcaaagattgcaacctgggagg
aatactactaatccttctcccatagtgtctgaagccatttgccaacagcaacaatcaggc
catgctatgccttgttctgatggcaataagaaccagcagacggaggaggtggaggaggag
aagaagcatccattccccatgaaacagatattgcttttggaaactaattggtacactagt
ccagaagaggtagctggtgctccaagttcttgtgcttcagacatttatcgactaggagtc
ctcctctttgagctattctgcacattcagttcacaagaagaaaaaagtactactatgtct
agtctgagacatcgagtgctcccacctcaattgcttttgaagtggcccaaagaagcttca
ttttgcttgtggttactgcaccctgagcccagtagtaggccaaatttgggtgagttgcta
caaagtgagttccttaataatccaagagaaaattttgaagaccgggaagcagcaatagag
cttagagaaaaaatagatgagcaggaactgttgctggagttccttttgctgacgcaacag
agaaaagaagaggctgcagataatttgaaagagacaatatcttttctctcttctgatata
gaagaagttacaaatatgcagactgccctgaggaaaaagggaggatctaacatggaagta
ggcaaagatccagcctcaaacaggactaataagactgatgacgatgattctgggaactct
ggttctagaaagcgatcccggccaggcatttgtacttgcaatttggaagagtctggtgac
catccagataagtatcagatatccaagacaggtgttgaaaatcaagggagctttctctca
aaaagttcccgattgatgaaaaatttcaaaaaattagagtcagcttattacttgatgaga
cgcagagcagtaaagcctacagataaaccatcgaatagacattctcaaataagtagtgat
ggcaggggttctattgtagcaactgaaagaagttctgttagtaatttgtcatcaaaaccc
aactctgataaggagacaccaagtggatggatcaattcattcttggagggcttgtgcaag
tatctctcttttagtaagttagaagtgaaggcagacttgaagcaaggggatcttctaaat
tcttcaaatcttgtatgctctctcagctttgaccgtgatggtgaattttttgcaagtgct
ggtgtaaataagaagattaagatttttgaatacaattcaatcttaaatgaagatcatgat
attcattatcctgttgtcgaaatggctagtagatcaaagttgagcagtatttgttggaat
agttatattaaaagccaaattgcttcaagtaactttgaaggtgtagtgcaggtatgggat
gtctcaagaagccaacttttcatggaaatgagagagcatgagaggagggtttggtctgtg
gacttctcagtagcagatccaactatgttggccagcggcagtgatgacggttctgttaaa
ctttggaacatcaatcagggcgttagtgttggaaccatcacaacaaaagcaaatgtatgc
tgtgttcaatttccttttgattctggccattctcttgcatttggatcagcagatcacagg
atatattactatgatctacgaaatgctaaaatgcctttatacactctaattgggcacaac
aagacggtgagctatgtcaagtttattgattcaacaacacttgtctctgcatcaaccgac
aacacgataaagctttgggatttgtcaatgtgctcatctcggattcttgattgccctctt
cagtcatatactggacatatgaatgtaaagaactttgttggcctgtccgtatctgaaggt
ttcattgcaactggatcagaaacaaatgaggttttcatataccacaaagcatttccaatg
cccgcatttgtatccaacaagtttacaagcacagacccgctttctggggacgtggtggag
gatgctgcgcaatttatctcatctgtttgttggcatggtaagtcatccaccttagttgct
gccaattcaatgggtaatatcaagctcttggagatggtttag

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