Ipomoea triloba (trilobed morning glory): 116010159
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Entry
116010159 CDS
T07384
Name
(RefSeq) nuclear pore complex protein NUP96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116010159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116010159
03036 Chromosome and associated proteins [BR:
itr03036
]
116010159
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116010159
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116010159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
116010159
NCBI-ProteinID:
XP_031105295
LinkDB
All DBs
Position
2:complement(24527349..24534134)
Genome browser
AA seq
1045 aa
AA seq
DB search
MGSRMKVDLGTADLLHLSQFQCKRRKVSLRGAVSGQVCSETEASLPTLQSADYFTVPCLS
ELAVREFTSPGYCSRVVDFTVGRVGYGCIRFIGETDIRGLDLEHIVKFRRHEVVVYEDES
SKPAVGMGLNKPAEVTLLLKLRSLKQNIEDSSRKILENLQLKTKRQGAQFISFDSSTGEW
KFLVQHFSRFGLSDDEEEDIAMDDVSPEGQDPLDMNGRELSDINEETSLVDPTLLSHSLP
AHLGLDPVKMKEMRMLMFPSEEENLDDYSGMPSHRRPHFNKESSRSPLQLQHVSHATVQK
SSPPLIRKTPLALIEYNVGSFGSGSPGSILMAQQNKGVLLKKTNAEGFKLDAKQQTPVTG
SLSHNVVDAALFMGRSFRVGWGPNGILVHSGAPVGASESIISSVINLEKVAIDQVARDEN
NKVRDELIDFCFASPLNLHKEINHETKEVEVGQCSLKLQRLVCDRLILSDVCRSYIEIVE
KQLEVPGLSSSSRIVLMHQAMVWELIKVLFSSRQVSGKPKSLEGDSEEDMIFEGKESASD
IDTEALPLIRRAEFSYWLQESVCHRVQEEVSSLNESSELQHIFLLLTGRQLDAAVELAAS
RGDVRLACLLSQAGGFTDNRSDIARQLELWSRNGLDFNFIEAERVRLLQLLAGNIHLALH
DVNIDWKRFLGLLMWYHLSPDTSLPIVFRSYQQLLNDGKAPCPVPIYIDEGPVEESLNCH
KEEKFDLAYYLMLLHANQEIDFGVLKAMFSAFASTNDPLDYHMIWHQRAVLEAVGAFSSN
DLHVLDMGLVSQLLCLGQCHLAIYVVLHMRYREDYPYLHATVIREILFQYCETWSSQDLQ
WQFIEGLGIPSPWLHEALAMYSNYYGDYSKSLEHFIECGNWQKAHTTFMTYVAHSLFLSG
EHSEIWRLTTSMEDYKAEIEDWDLGAGIYLSFYFLRSSLQEENDAMNELDSLEKKNDACA
EFISHLNESLAVWSSKLPVDARVVYSKMAEEISNLLLSDSGEGSTSEVQLSCYDTVFSAP
FPEDLRTYHLQDAVSCFTSYLSGFA
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgagaatgaaagttgatttggggactgctgacttacttcatttatcccaattt
caatgcaaaagaagaaaggtttctcttcgtggagcagtttcgggtcaggtttgctccgag
actgaagcttctttgcctactctacagtctgctgattattttacggtaccttgcttgagc
gaattggctgttagggagtttacgagtcccggttactgtagtagagttgtagattttact
gttggaagggttggttatgggtgtattagatttattggggagactgacataagagggctg
gatttggaacacattgttaagtttaggcggcatgaagtggttgtttatgaggatgaaagt
tccaagcctgcagttggtatgggacttaacaagcctgctgaagtaactctgttactgaaa
ctaagatccttaaaacaaaatattgaagattcatcaagaaaaatcctagagaatttgcaa
ttgaaaacaaagaggcaaggagcacagttcatttcatttgacagctcaactggtgaatgg
aaattcctggttcaacattttagcagatttggtttgagtgatgatgaagaagaagatatt
gctatggatgatgtgtctccagaaggtcaagatcctttggatatgaatggacgtgaactt
tccgatatcaatgaagaaacctccttggttgacccaacactcctctcccattctcttcca
gctcatctgggccttgatcccgtgaagatgaaagaaatgcgaatgctgatgtttccatct
gaggaagagaatttagatgattatagtggtatgccttcacatcgtagaccacacttcaat
aaagaatcctcaagatcaccactgcagttgcagcatgtttcacatgcaacagtccagaaa
agtagccccccattgattcgcaagacacctttagctcttattgaatacaatgttggtagt
tttggctcaggctcacctggttctattttgatggcacaacaaaacaagggggtgctctta
aagaaaacaaatgctgaaggatttaagctggatgccaagcagcaaactcctgtaactggt
agtctttctcacaatgtggttgatgctgcattgtttatgggtagatcatttcgagtagga
tgggggcctaatggcatccttgttcattctggtgcacctgttggagctagcgaatctata
atatcttctgtaatcaacttagaaaaagttgcaatcgaccaagtggcaagagatgaaaat
aacaaagtcagggatgaacttatagatttttgcttcgcttcacctctgaatcttcacaag
gaaataaatcatgaaacaaaagaggttgaggtggggcagtgcagcttaaagcttcaaagg
cttgtatgtgatcgtttgatcctttcagatgtttgccggagctatattgaaattgttgag
aagcaactggaggttcctggattgtcatcctcttctcgtattgtattgatgcaccaagca
atggtctgggaactaattaaagttctcttttcttctaggcaagtgagcgggaaaccaaaa
tctctggaaggtgatagtgaggaagacatgatatttgaagggaaagaaagcgcatcagat
atagacacagaggcacttccactgattagaagagcagaattcagttattggttgcaggag
agtgtttgtcaccgggttcaggaggaagtgagctccttgaatgagtcgagtgagctgcaa
cacatattcttgctgctgacaggccgacagctagatgctgccgtggagcttgctgcttct
agaggagatgttagattggcatgtctactgagccaagctggtggttttacagacaaccgc
tctgatattgctcgacagcttgagctttggagcagaaatggattggactttaattttatt
gaagcagaaagagttagacttcttcagttgcttgctggcaacatccatttggcattacat
gatgtaaatatagactggaaaagatttttgggactgttgatgtggtatcatctttcacct
gatacttcgttgcctattgttttccgctcatatcaacaacttctcaatgacggcaaagct
ccatgtcctgtgcctatttacattgatgaaggaccagtagaagagtctctgaactgccac
aaagaggaaaagtttgacctagcttattatcttatgctacttcatgccaatcaagaaatt
gattttggtgttttaaaggcaatgtttagtgcctttgcatcaacaaatgatccacttgac
taccatatgatttggcatcaacgagcagttctagaagcagttggtgctttcagttctaat
gatcttcatgttttagacatgggacttgtttcccaactgctttgtcttgggcaatgtcat
ttggccatctatgtggtgctccacatgcgatatcgtgaagattacccatatttacatgcc
actgtgataagggaaatccttttccaatattgtgaaacttggagttctcaggatttgcaa
tggcaatttattgagggcttgggtattccttcaccatggttacatgaggcgctggcaatg
tattccaattattatggtgattactcaaaatctctagaacactttattgagtgtggaaac
tggcagaaggcacataccactttcatgacttatgttgctcattctctctttttatcaggg
gagcactctgagatatggagactcacgacctccatggaggactacaaagcagagattgaa
gattgggacttaggagctggaatatatttatcattctattttctaagaagttcattgcag
gaagagaatgatgcaatgaatgaactggattctctggagaagaaaaatgatgcatgtgca
gagttcattagtcacttaaatgagtctctggctgtttggagtagcaaactacctgtggat
gcaagggttgtttattcaaagatggcagaggaaatatcgaatttgcttctatctgatagc
ggtgaagggtcaacaagcgaggttcaattaagttgttatgatacggtgtttagtgcaccc
ttccctgaagaccttcggacataccatctgcaggatgcagtgtcgtgttttacatcttac
ctttcaggatttgcttag
DBGET
integrated database retrieval system
