Ipomoea triloba (trilobed morning glory): 116010246
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Entry
116010246 CDS
T07384
Name
(RefSeq) actin-interacting protein 1-2-like
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
itr04990
]
116010246
Domain-containing proteins not elsewhere classified [BR:
itr04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
116010246
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_2nd
RMC1_N
Beta-prop_NWD2_C
KNTC1_N
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
116010246
NCBI-ProteinID:
XP_031105427
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All DBs
Position
2:19212215..19216765
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AA seq
613 aa
AA seq
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MHNMLAKLKETYACVPSTERGRGILISGDPKSNSILYCNGRSVIIRYLDRPLEVAVYAEH
AYQTTVARYSPNGEWIASADVSGTVRIWGTHNDFVLKKEFRVLSGRIDDLQWSPDGMRIV
ASGDGKGKSLVRAFMWDSGSNVGEFDGHSKRVLSCAFKPTRPFRIATCGEDFLVNFYEGP
PFKFKLSHRHHSNFVNCLRFSPDGSKLISVSSDKKGVLYDAKTGDKIGELSSENGHQGSI
YAVSWNPDSKQVLTVSADKSAKIWDISDDGNGKVKKTLTCSGSGGVEDMLVGCLWQNDHL
VTVSLGGTISIFSASNLDKDPVSFSGHIKNANSLAVLNSEPRVILSSSYDGLIVKWLQGI
GYCGKLERKANSQIKYFAAVGGEIVSFAFDNKIWRASLSGDQCTSEDNVDIGNQPKDLSL
ALHSPELALVAIETGVVLLRGTHVVSTINLGFPVTACVISPDGTEVIVGAQNGKLYIYSV
TGDSLNEEAVIEKHRGAITVIRYSPDLSMFASGDANREAVVWDRASREVKVKNMLYHTAR
INCLAWSPDNSKVATGSLDTCVIVYEVSKPASDRTTIKGAHLGGVYGLSFLDDYNIVSSG
EDACVRIWTLTPQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacatgttagcgaagctcaaggagacgtatgcttgtgtcccttcaacggagcgg
ggtcggggcatcctcatatcgggtgacccgaaatccaactccatcctctattgcaatggc
cgatccgtcatcatccgctaccttgaccgccccctcgaggtcgccgtctacgccgagcac
gcttaccagaccaccgtcgccaggtactcccctaacggcgagtggatcgcctccgccgac
gtctccggcaccgtccggatctggggcacccacaacgattttgtactcaagaaggagttc
cgggtgctctccggtcggatcgacgatctccagtggtcccccgatgggatgcgcattgtc
gcttccggtgatggcaagggcaagtccctagttcgcgccttcatgtgggattcaggttca
aacgtgggagaatttgatggccactcaaagagagttttgagttgtgcatttaagccgacg
aggcctttccggattgcaacatgcggtgaagactttttggtgaacttttatgaaggaccc
ccttttaagttcaagctatctcacaggcatcattcgaattttgtaaactgcttgcggttc
tctccagacggtagtaaattaattagtgtcagctctgacaagaagggtgtactatatgat
gccaaaacaggggataaaattggagagctgtcttccgagaatggccatcagggcagtata
tatgctgtgagctggaatcctgatagtaaacaggtgctaactgtgtcagctgacaagtct
gccaaaatatgggatatatctgatgatggaaatggaaaagtgaagaaaacattaacttgt
tctggttcaggtggagttgaagacatgctagtcgggtgtctatggcagaacgatcatctt
gtaactgtttctcttggtggcactatttccatattctctgcaagcaatttagacaaagat
cctgtttctttctctggacacataaagaatgctaattcattagcagtactgaatagtgag
ccaagagttatattatctagcagctatgatggtttaattgttaaatggcttcaaggcatt
ggttattgtggaaaattagagaggaaggcaaattcccaaatcaaatattttgcagctgtt
ggaggagaaattgtttcatttgcattcgacaataagatttggagagcatctctaagcgga
gatcaatgtaccagtgaagataatgttgacattggcaatcaaccaaaagacttgagcctt
gctcttcattcacctgaactggctttagttgcaatcgagacaggagttgttctccttcga
gggacacatgtggtttcaaccatcaaccttggatttcctgtgacagcgtgtgtaatttca
cctgatggaactgaagttattgttggtgctcagaatggtaaactatatatatattctgtt
acaggcgattctctcaatgaagaggctgtcattgaaaaacataggggagctatcactgtc
attcgttactctccagatttgtccatgttcgcctcgggcgatgcgaacagagaggctgtt
gtctgggatcgtgcttctcgtgaggttaaggttaagaatatgttataccatactgcccgg
ataaattgcttagcatggtcccctgacaatagcaaggtagcaactggatctctagatacc
tgtgtcattgtatatgaagtgagcaagccagcctctgatagaactacgatcaagggagct
catttgggtggggtatatggactatctttcttggatgactacaatattgtaagttcgggg
gaggatgcttgtgtccgcatatggactctaaccccacaatga
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