Ipomoea triloba (trilobed morning glory): 116010308
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Entry
116010308 CDS
T07384
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03015
mRNA surveillance pathway
itr04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116010308
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116010308
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
itr01009
]
116010308
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116010308
03036 Chromosome and associated proteins [BR:
itr03036
]
116010308
Protein phosphatases and associated proteins [BR:
itr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
116010308
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
116010308
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
116010308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
Htt_N-HEAT_1
Vac14_Fab1_bd
PDS5
HEAT_EF3_N
HEAT_EZ
CLASP_N
Adaptin_N
Cnd1
TAF6_C
Motif
Other DBs
NCBI-GeneID:
116010308
NCBI-ProteinID:
XP_031105518
LinkDB
All DBs
Position
2:16871790..16879861
Genome browser
AA seq
584 aa
AA seq
DB search
MEEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDDDEV
LLAMAEELGVFIPYVGGVDHASVLLPPLEGLCSVEETCVREKAVESLCRIGSQMKESDLV
EAFIPLAKRLAAGEWFTARVSSCGLFHIAYPSAPEPLKTELRTIYSQLCQDDMPMVRRAA
ATNLGKFAATVEQPHVKTDIMAMFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCAAQIL
PVIVNFAQDKSWRVRYMVANQLYELCEAVGPEATRTDLVPAYVRLLRDNEAEVRIAAAGK
VTKFCRILSPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLLPIF
LSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPL
LASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLAEEFGPEWAMQHIIPQVLEM
INDPHYLYRMTILHAVSLLAPVMGSEITCNKLLPVIITASKDRVPNIKFNVAKVLQSLIP
IVDQSVVEKTIRPCLVELSEDPDVDVRFFANQALQAADQVMMSS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcccttgtatcccattgcggttctaattgatgagctgaagaatgaagacatt
cagcttcgtttgaactcaatccgccgtctgtctacaattgctcgggcacttggggaggag
agaactcggaaggaattaattccttttttgagtgagaacaatgatgatgatgatgaagtg
cttcttgcaatggcagaagaattgggagttttcattccatatgttggcggagttgatcat
gctagtgttttgcttcctccactggaaggtctctgcagtgttgaagagacttgtgtcagg
gaaaaagctgttgagtcattgtgcagaattgggtctcaaatgaaggaatcagacttggta
gaagcatttattcctcttgcaaagaggctggcagcaggcgagtggtttactgctcgtgta
tcatcatgcggattatttcacattgcttatcccagtgccccagagccattaaaaactgaa
cttagaactatatatagccaattgtgccaagatgacatgcctatggtgaggagagcagct
gcaacaaatcttgggaagtttgctgctactgttgaacaacctcatgtgaagactgacata
atggcgatgtttgaggatttgactcaagatgatcaagattctgtccgtttattggctgtt
gagggttgtgcagcactaggaaagctattggagcctcaagattgtgctgctcagattctt
cctgtcatagttaattttgctcaggataagtcttggcgtgtccgttacatggttgcgaat
caactatatgagctttgtgaggcagttggacctgaggcaaccagaacggatctggttcca
gcgtatgttcggttacttcgtgataatgaggctgaagtgcgtattgctgcagctggcaaa
gtaactaaattctgtcggattttaagtcctgaattagcaatccagcacatccttccttgt
gtaaaggaactatcttcagattcatctcagcatgtgcgctctgctttggcttcagtcata
atgggaatggcacctgttctaggaaaggatgcaacaattgagcaacttcttccaatattt
ctttcacttttaaaggatgagtttcctgatgttcgtttgaatattatcagcaagcttgat
caagtcaatcaggtgatcggaattgatctcttgtcccagtctctgctgcctgctatagtt
gaacttgcagaagatagacactggagagtgcgcctagcaataatagagtacataccttta
ttggccagtcagttaggtgttgggttttttgatgataagctcggggccctttgcatgcaa
tggctaaaggataaggtttactccatcagagatgcagctgcaaataatgttaagcgcctt
gcagaggaatttggaccagaatgggcaatgcagcacattattccacaggttctggaaatg
attaatgacccacattatctttatcggatgaccattcttcatgcagtatctcttcttgcc
ccagtaatgggctcagagatcacttgcaataaacttctgccagtgattattactgcatcg
aaggacagggtaccaaatataaagttcaatgtggcaaaggtgttgcagtctctcattcct
attgttgaccaatctgttgtggagaagacaatccgtccatgtttggttgagcttagcgag
gatccagacgtcgatgtgagattcttcgccaaccaagcactgcaagccgctgatcaagtt
atgatgtcaagctaa
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