Ipomoea triloba (trilobed morning glory): 116010323
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Entry
116010323 CDS
T07384
Name
(RefSeq) oligouridylate-binding protein 1B-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116010323
03041 Spliceosome [BR:
itr03041
]
116010323
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
116010323
Spliceosome [BR:
itr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116010323
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
116010323
NCBI-ProteinID:
XP_031105536
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Position
2:complement(1987647..1992663)
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AA seq
423 aa
AA seq
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MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAAPPIEPIPSGNMPPGFDPSTCRSVYVGN
IHQQVTEPLLQEVFSSTGPVEGCKLIRKEDSSYGFVHYYDRASATLAILSLNGRHLFGQP
IKVNWAYASSQREDTSSHYNIFVGDLSPEVTDAMLFTCFSTYPSCSDARVMWDQNTGRSR
GYGFVSFRNEQDAQCAINDLTGKWLGSRQIRCNWATKGANNNDTKQSSDAKSVVELTNVS
SEDGKEATNNEAPENNPQFTTVYVGNLAPEVTQLDLHRHLHALGAGVIEEVRVQRDKNFG
FVRYNTHAEAALAIQMGNAQSILRGRQIKCSWGNKPTPPGTASNPLPPPAPAPMQGLSAI
DLLAYERQVALAKMGGIHAFVQPQGQLPPKQASMGMGVAGASQAIYDAGFQNMAAAQQLM
YYQ
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccagaggctgaagcaacagcaacagcaagccttgatgcaacaagctcttctt
caacaacagtctctttatcaccctggcttattggctgctcctccgattgaaccaatacca
agtggaaatatgcctcccgggtttgatccaagcacgtgccgcagtgtgtatgttggcaat
attcaccagcaggtgactgaaccacttctgcaggaagttttctcgagtactggtcctgtt
gaaggctgcaaacttatacgaaaggaagattcatcctatggttttgttcattactatgac
cgtgcatctgctacccttgctatattgtcacttaatggaaggcatctctttggacagcct
ataaaagttaattgggcatatgccagtagccagagggaggatacctcaagtcattacaat
atatttgtgggtgaccttagccctgaagttactgatgctatgttatttacctgcttctca
acttaccctagctgttctgatgcaagggtcatgtgggatcagaacactgggcgttctaga
ggttatggatttgtttctttcagaaatgagcaggatgctcaatgcgccattaatgatcta
acaggaaaatggcttggcagtagacaaattcgttgtaactgggctacaaaaggtgctaat
aacaatgataccaaacaaagttctgatgcaaaaagtgttgtggagctgacaaatgtctca
tcagaagatggtaaagaggcaacaaacaatgaagctcctgaaaataacccgcaattcacc
actgtgtatgtgggcaatcttgctcctgaggtaacacagcttgaccttcatcgtcattta
catgcccttggtgctggggtaattgaggaagttcgtgtccagcgtgataaaaattttggt
tttgtaagatataacacacatgccgaggctgctctcgctattcagatgggaaatgctcag
tcaattcttcgtggaagacagattaagtgctcatggggtaacaagccaacaccacctgga
actgcttcaaaccctcttcctccaccagctccggcacccatgcagggtctgtcagccatt
gatcttttggcttatgagcgccaggtagcattggccaagatgggaggcattcatgccttt
gtgcaacctcagggtcaacttccaccaaagcaagcatccatgggtatgggcgtggctgga
gcaagccaggccatatatgatgctggttttcagaacatggctgctgcacaacagcttatg
tactatcagtga
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