KEGG   Ipomoea triloba (trilobed morning glory): 116010334
Entry
116010334         CDS       T07384                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
itr  Ipomoea triloba (trilobed morning glory)
Pathway
itr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:itr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116010334
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:itr03019]
    116010334
   03041 Spliceosome [BR:itr03041]
    116010334
Messenger RNA biogenesis [BR:itr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     116010334
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     116010334
Spliceosome [BR:itr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    116010334
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2
Other DBs
NCBI-GeneID: 116010334
NCBI-ProteinID: XP_031105555
LinkDB
Position
2:868243..871640
AA seq 425 aa
MDYGVAEQNDVAYYGGDTGEGDLQYDEENRQELFSRSGGGGGGDLEPPIRNLDGSSAGHE
LKHSIDDSSPSAGKLFVGGIAWETSEECFNRYFSKYGDVIDSVIMMDKVSGRPRGFGFVT
FADPEVANQVLQEEHVIDGRVVEVKRTVPREDTPFRRVSKTKKIFVGGIPPTLTEDEMKE
YFSSYGSVVEHQIMLDHNTGRSRGFGFVTFESEDAVQKVLSDGRMHELNGKQVEIKRAEP
KRAGGDRASESRMHRGNSNMHSYGNVNGDAEDFGGGYGGKMRKGYGGGYDGYGNYGPYGN
YAGNYGMGSAGFYGGYGGYGYGYGFGGSMYGAAAAAGYSGNSYVIPGNYGGSSGYAAAGA
GKGYANTGHGGAKGYGSVGGDGEYDGGEVHGSSGNDTAYGGAKGYGGNVYGNEGAAAGRF
HPYRK
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggattacggtgttgccgaacaaaacgacgtcgcttattacggcggcgacacgggggaa
ggtgatcttcagtatgacgaagaaaaccgacaagagctgttttcaagaagcggtggcggt
ggcggaggagatttagaaccgcccattcgtaacctagacggtagtagcgcaggccacgaa
ttaaagcattcaatcgatgattcttctccttcggcaggaaagctatttgttggaggcatt
gcttgggagacatctgaagaatgttttaacaggtatttcagcaagtacggagatgtaatt
gattctgtaataatgatggataaggtctctggacgaccacgaggttttggattcgttaca
tttgctgatccagaagttgcaaatcaggtgttacaggaagaacacgtaattgatggcaga
gtggtggaagtgaagaggacagtaccaagggaggacactccattcagaagagtgtcaaaa
acaaagaaaatatttgttggtggtattccaccaactcttactgaagatgaaatgaaggaa
tacttctcttcctatggaagtgttgtggagcatcaaattatgctggatcacaacactggt
cggtcccgaggctttggctttgtaacttttgagagtgaagatgctgttcagaaggttcta
tctgatggccgcatgcacgaacttaatggaaaacaagttgaaattaagagggctgaacca
aagcgagctggtggagatcgtgcaagtgaaagcaggatgcatcgtggcaacagtaacatg
cactcatatggcaatgtgaacggtgatgcagaggattttggcggtggatatggcgggaaa
atgcgcaagggatatggtggtggttatgatggatacggcaactatggtccttatggaaac
tacgctgggaattacggaatgggttctgcaggattctacggtggatatggcgggtatggt
tatggatatggatttggtggatccatgtacggtgctgctgctgctgctggatacagtggc
aacagctatgtaattcctggtaattatggtggttcgagtgggtacgctgctgcaggtgct
ggtaaaggatacgccaatacagggcacggtggtgcaaaaggctatggcagcgtaggcggt
gacggtgaatacgatgggggcgaagtccacggaagcagcggtaatgacactgcatacggc
ggtgccaaaggttacgggggcaatgtttacggaaacgagggtgcagctgccggaaggttc
catccttaccggaagtga

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