Ipomoea triloba (trilobed morning glory): 116010535
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Entry
116010535 CDS
T07384
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 8
KO
K05391
cyclic nucleotide gated channel, plant
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
116010535
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
itr04040
]
116010535
Ion channels [BR:
itr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
116010535
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Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
bPH_10
Motif
Other DBs
NCBI-GeneID:
116010535
NCBI-ProteinID:
XP_031105850
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Position
2:23736124..23740533
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AA seq
733 aa
AA seq
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MAGKANCGFNIDGMASAIPPTNPSSMSIKLGVIRGSEGLMTFGRSLKCGVTRVVFPEDLK
VSEKMIFDPQDKSLLFWNRLLVISCIFSVAVDPLFLYLPVFKSDEDHCLHIDSSLAYTTT
TLRTIIDSFYLIRMILQFRTAYIAPSSRVFGRGELVIDPKEIASRYLHRYFIVDLLSILP
LPQIVVLRFLNGSRGSNVVGTKRALVLLVILQSIPRFFRFLPLTSDLKKTSGVFAETAWL
GAAYYMLWFMLASHIFGAYWYLLAVERKNFCWQKACLESADCSPSYSLLFCSLDRHKTAN
LTGWRQITEDVLHKNCAADNDNRFNYGIYTQAVSSGILDSEEFIPKYCYCLWWGLQNLST
LGQGLETSTYSLEVLFSIALAIIGLLLVAILIGNMQTYLQSITVRLEEMRIKRRDSEQWM
HHRVLPPELRERVRRYDQYKWLETRGVDEESIVQNLPVDLRRDIKRHLCLNLVRRVPLFA
NMEERLLDAICERLKPSLFTENTYIVREGDPVDEMLFIIRGRMESVTTDGGRSGFFNRGI
LKECDFCGEELLTWALDPKAGANLPPSTRTVKALTEVEAFALIADEVKFITTQFRRIHSR
QVQHTFRFYSQQWRTWASMYIQVAWRRYTRRKNIELRHSEADSDDDDDQGVVYGDGAGKD
ADNEETMLIRGFSSSSSSLSNRGIRATMYASRFAANALSKVRKFRSSSLIMKPPKPPEPN
FDNEDLTKVQRFI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaaggcgaattgtggctttaatatagacggaatggcttctgctataccacct
accaatccatcatcaatgtcaataaaactgggagtgataagaggatctgaagggctaatg
acattcggtcgatcactgaagtgtggagttaccagagttgtgttcccagaagatctcaag
gtctctgaaaaaatgatatttgatcctcaggataagtccctccttttttggaataggctt
ttggttatttcatgtatcttttcggtagcagttgatcctctatttctttaccttccggtt
ttcaagagtgatgaagaccactgtcttcacatagattcaagtttagcatacacaacaacc
accttgaggacaataatagattcattttacctcatccgaatgattctccagtttcgcaca
gcttacattgctccttcatctcgtgtttttggacgaggtgaactcgtgatagatcccaaa
gaaattgcatccagatacctacatcgttattttatagttgatcttctttctattctccct
ctgcctcagattgtggtcttgagattccttaatggatcccgaggctcgaatgtagtaggt
acaaagagagctctagttctccttgttattcttcaaagcattcccaggtttttccggttt
ttacctctaacttcggacttgaaaaagacttctggagtgtttgctgaaaccgcgtggctt
ggcgctgcatattacatgttgtggttcatgctggcaagtcatatatttggagcttactgg
tacctgttagctgtggaacgtaaaaatttctgttggcaaaaagcgtgtttagaaagtgca
gattgtagtccaagttattctttactgttttgttcacttgatagacataaaaccgcaaat
ttaactggttggagacaaataactgaagatgttctccacaaaaactgtgctgctgataac
gataatcggtttaactatggcatatacacccaagctgtgtcatctggtattcttgactct
gaagaattcatccccaagtattgctattgcttgtggtggggcttgcagaatttgagcact
cttgggcagggtcttgaaacaagtacatattctctggaggttctattttcaatagcattg
gccattattgggctcctgctggttgctattctcattggaaacatgcagacgtatcttcaa
tctataacggttaggctggaggagatgaggataaaaaggcgcgactcggagcaatggatg
catcacagggtgctgccaccggagctgagggaaagagtgaggcgttatgatcagtacaaa
tggttggaaactagaggtgtagatgaagaaagtatagtgcagaatctgcctgtagatctc
agaagagatattaagcgccatctttgcctaaatttagttagaagggtgcctctttttgca
aacatggaagagaggctgttggacgccatatgcgagcgactaaagccaagcttgttcaca
gaaaacacatacatcgtccgagagggcgatccagtggacgagatgctcttcatcatccgg
gggcgcatggagagcgtgacaacagacggtggcagaagcggtttcttcaatcgtggaatt
ctaaaggagtgcgatttttgcggggaggagcttctcacatgggcgctagacccaaaagca
ggggcgaacttgccgccatcaactcgcacggtgaaggccttgacggaagtggaagccttc
gcactgatagccgacgaggtgaagttcatcaccacccagttccggcgcatccacagccgg
caagtgcagcacactttccggttttactcgcagcagtggaggacgtgggcctccatgtac
atccaggtcgcgtggcgacgctacactcgccgaaaaaatatagaactccgccatagcgag
gccgactccgatgacgatgatgaccaaggggttgtgtacggcgatggtgcaggcaaggac
gccgataacgaagaaaccatgttgatcagggggttttcgtcttcctcctcctcccttagc
aaccgaggcatccgcgccaccatgtatgcttctcggttcgctgcaaacgcgctatcaaag
gtgcgcaaatttagatcttctagcctcatcatgaaacctcccaagcctcctgagccaaac
tttgataatgaggatctcactaaggttcaacgttttatttga
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