Ipomoea triloba (trilobed morning glory): 116010564
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Entry
116010564 CDS
T07384
Name
(RefSeq) cyclic nucleotide-gated ion channel 4
KO
K05391
cyclic nucleotide gated channel, plant
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
116010564
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
itr04040
]
116010564
Ion channels [BR:
itr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
116010564
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Motif
Pfam:
cNMP_binding
Ion_trans
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
116010564
NCBI-ProteinID:
XP_031105893
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All DBs
Position
2:7245195..7249400
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AA seq
678 aa
AA seq
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MASEFERSRNNNFYDTDGEEEEDDDEEEEESEDGGGEEQGAEKNLFNCRSIYGGGCGGRR
RGGSVFGKVLDPKAAWVQEWNRVFLLVCATGLFVDPLFFYTLSISDNCMCLFVDGWFATT
VTVLRCMTDALYLWNMWLQFKINRRPHITGARTRLHNNRMGMGAALRLWKAKKGFLFDLF
VILPMPQIVLWVAIPALLKRGLTTEVMTVLLIMFLLQYLPKIYHSVRILRRMQSLSGYIF
GTVWWGIALNMIAYFVASHAVGACWYLLGIQRAARCFKEQCGMKNGCGLRMLACEDPIYY
GTTTVVKDRSRLMWGENAHARTTCLTEDNFTYGAYRWTVQLVINENRLEKILFPIFWGLM
TLSTFGNLESTTDWLEVVFIIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIE
WWMRRRRLPTEFRQRVRNYERQRWAAMRGVDECEMIRNLPEGLRRDIKYHLCLDLVRQVP
LFQHMDNLVLENICDRVKSLIFTKGETITREGDPVQRMLFIVRGHLQSSQVLREGVKSCC
MLGPGNFSGDELLSWCLRRPFVERLPPSSSTLVTLEATEAFGLEAQDVKYVTQHFRYTFV
NEKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSRCSSLGEDRLR
LYTALLTSPKPNQDDFDF
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgaatttgaacgttcacgaaacaataatttctacgacaccgatggcgaagag
gaggaagacgacgatgaagaagaagaagaaagcgaagacggcggcggcgaggagcaaggg
gcggagaaaaatttattcaactgccggagcatttacggcggcggttgcggcggtcggcgg
cgcggaggatccgttttcggcaaggtattggaccctaaagccgcatgggttcaggaatgg
aaccgggttttcctcctagtgtgcgccaccggtctattcgtggacccgctcttcttctac
actctctctataagcgacaactgcatgtgcctgttcgtggacggctggttcgccaccacc
gtcacggttctccggtgcatgaccgacgccttatacctctggaacatgtggctgcagttc
aagattaaccgccgcccgcatattacgggtgccaggactagacttcataacaaccgtatg
ggtatgggtgccgccttacgactctggaaggctaagaagggcttcctatttgatcttttt
gttatccttccaatgcctcagatagtgctgtgggtggcaatcccagcattgctgaagaga
gggttgacgacagaagtgatgacagttttgttaataatgtttctgctccaatacctgccg
aagatctaccactccgtccgcattctgcggcggatgcagagtctctccggctacatcttc
ggcaccgtctggtgggggatcgctctcaacatgatcgcatattttgttgcctcccacgca
gtaggggcatgttggtatttgctgggtatccaacgagctgctagatgctttaaagaacaa
tgtgggatgaaaaatgggtgtggtcttcggatgctggcttgtgaagacccaatatactat
ggaaccacaactgttgtgaaggacaggtcacgtttgatgtggggtgaaaatgcgcacgca
agaacaacttgtctcaccgaagataattttacttatggtgcatatagatggactgtccaa
cttgttataaacgaaaatcgtctcgaaaagatactttttcctatcttctggggactcatg
actctcagtactttcggtaatttggagagcacaacagattggctagaggtagttttcata
atcattgtgcttaccagtgggctccttcttgtcaccatgttgattggaaacatcaaggtg
tttttgcatgcaacgacgtcaaagaaacaggcaatgcagttgaagatgaggaacatagag
tggtggatgaggaggcggcggttgccgacggaattccggcagagagtgagaaattacgag
cggcagcgctgggcggcaatgcgcggcgttgatgaatgtgaaatgatccgaaacctccct
gaaggtcttaggagagacatcaaatatcatctgtgtttggacttggttagacaggttcct
ttatttcaacatatggataatttggtcctggaaaacatatgtgacagggtgaaatccctt
atatttacaaagggagaaacgataacaagagaaggtgatccagtgcagagaatgttattt
atagtaagaggtcatctccaaagcagccaagtactacgagaaggcgtaaaaagttgctgc
atgttaggccccggaaacttcagcggcgacgagctcctctcatggtgtctccgccgcccc
ttcgtggagcggctaccgccgtcctcctccacgctagtcaccctggaagccacggaggcg
ttcgggctggaagcccaagacgtgaagtacgtaacgcagcatttccggtacacatttgtg
aacgagaaagtgaagagaagcgcaaggtattactctcccgggtggagaacatgggcggcg
gtggcgattcagctggcctggaggagataccggcatcggttaacgctgacctcgctctcg
ttcataaggccgaggagaccgctgtctagatgttcttctctcggagaagacaggctcagg
ctttatacagcgttgttgacatccccgaaacctaatcaggatgattttgacttctaa
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