Ipomoea triloba (trilobed morning glory): 116010675
Help
Entry
116010675 CDS
T07384
Name
(RefSeq) probable U3 small nucleolar RNA-associated protein 7
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
itr03009
]
116010675
Ribosome biogenesis [BR:
itr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
116010675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WD40_RFWD3
WDR90_beta-prop_4th
Cytochrom_D1
Beta-prop_EIPR1
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
116010675
NCBI-ProteinID:
XP_031106031
LinkDB
All DBs
Position
2:complement(4514211..4519025)
Genome browser
AA seq
537 aa
AA seq
DB search
MGVKAEKIKPGRNFASFVAEDSSEVMDENVKKYLRGEPINLEVLQDKKLKGQLAVREELY
GRSAKAAAKAEKWLMPSEAGYLEPEGIEKTWRIKQEAIAREVDILSSRNQYDIVLPDLGP
YTLDFTSSGRYMALAGRKGHLAIVDMKNLNLIKELQVRETVRDVVFLHNELFFAAAQKKY
SYIYNRDGTELHCLKEHGAALKLQFLKNHFLLASINKYGQLHYQDVTTGEMVGNYRTGLG
RSDVMQVNPFNSVISVGHSGGTVSMWKPTSAAPLVKMLCHNGPITALAFHSNGHLMATAG
MERKIKLWDLRKYEVLQTLPGHAKTLDFSQKGLLASAIGSSVEVLGDLSGSQNYSRYMGH
SMAKGYQIQKVLFRPYEDVLAIGHSMGWSSILIPGSGEPNFDTWVANPFETSKQRREKEV
KSLIDKLPPETIMLDPSKIGTVRSTRKKEKPTKEDRESGMEAAIKEAKSVTVKNKTKGRS
KPSKKARKKQEAVEKAKRPFFEQQMSGAESSKKRMRASNDDHLPKSLQRFVKKRSTA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgaaggcggagaagataaagccgggaagaaattttgcttcttttgtggctgag
gatagttctgaagtgatggatgagaatgtaaagaagtacctcagaggagaaccaataaat
ttggaggtcttgcaagataagaagttgaagggccagcttgctgtcagagaagaattgtat
ggaagatccgcaaaagctgctgcaaaagctgaaaagtggctaatgccaagtgaagcgggt
tacctggaacctgaggggatagagaagacatggaggatcaagcaggaggcaattgctcgt
gaagtagacattttgagctcaagaaatcaatatgatattgtcttaccagatcttggacct
tatactctggatttcacgtctagtggtcgttacatggctttagctggccggaagggacac
cttgctattgtagacatgaaaaatctgaaccttattaaagaactacaggttagagaaaca
gtacgtgatgtagtattcttgcacaatgaactgttttttgctgctgctcaaaagaagtat
tcatacatatacaatcgggatggtactgagctccattgccttaaggaacatggtgccgca
ctaaaacttcaatttctaaaaaaccatttccttttggcatctataaacaaatatggtcag
ctccattatcaagatgtcactacaggggagatggttggtaactaccgaactggcctaggt
cgaagtgatgttatgcaggtgaatcccttcaatagtgtgatttctgtaggccattccggt
ggcactgtgagcatgtggaagcccacgagtgctgctcccctcgtgaaaatgctctgccat
aatggccctatcacggctctagcattccattctaatggccatctcatggctaccgctgga
atggaaaggaagataaagctctgggacttgaggaagtatgaggttctccaaacgttaccg
ggccacgccaagaccttggatttcagtcaaaaaggtttgctcgcaagtgcaatagggtct
tctgtcgaggttttaggagatctttctggatctcagaactatagccgctatatggggcac
tctatggctaaaggttaccaaatacagaaggtgttgtttcgaccatatgaagatgttctg
gccattgggcactccatgggttggtcttccatcttgattcctggatctggagagcccaac
ttcgacacctgggtggcgaatccttttgaaacttctaaacagaggagggagaaggaagtt
aagtctctcattgacaagcttcctccagagacaatcatgttggacccctcaaagattggg
actgtgaggtctactaggaagaaggaaaagccgacgaaagaggacagggagtcggggatg
gaagctgctattaaagaagccaagagcgttaccgtgaaaaacaaaacaaaaggtagaagc
aaacccagtaaaaaggcaaggaagaaacaggaagcagttgagaaggccaagagaccgttc
ttcgaacaacaaatgagcggggctgaatcgtccaagaagagaatgagagctagcaatgat
gatcacctaccgaaatccctgcagcgatttgtcaaaaagagatcaacagcatga
DBGET
integrated database retrieval system
